RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MTX2O75431 263 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM225BP0DP42 221 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CD1DP15813 335 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ANXA7P20073 488 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 APEX1P27695 318 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TPPP2P59282 170 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ERVK-16P61578 105 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ZXDBP98169 803 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ILKQ13418 452 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SMN1Q16637 294 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 B3GLCTQ6Y288 498 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 OR2D3Q8NGH3 330 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 FKRPQ9H9S5 495 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 KCNK12Q9HB15 430 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GOLGA2P5Q9HBQ8 144 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 EHFQ9NZC4 300 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 UBL4AP11441 157 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ATP1B2P14415 290 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 KITLGP21583 273 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GABRR1P24046 479 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 PRDX3P30048 256 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 HTR3AP46098 478 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RPL29P47914 159 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GLO1Q04760 184 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RAB40BQ12829 278 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RGMBQ6NW40 437 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 BTNL8Q6UX41 500 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM182Q6ZP80 229 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 KIAA0907Q7Z7F0 614 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GATSQ8NAP1 163 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF680Q8NEM1 530 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 OR52P1PQ8NH57 321 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 HCAR2Q8TDS4 363 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 DYRK2Q92630 601 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SENP5Q96HI0 755 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SIGLEC10Q96LC7 697 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RAB11FIP5Q9BXF6 653 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 DDX31Q9H8H2 851 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 PDE7BQ9NP56 450 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RALYQ9UKM9 306 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CSNK1G3Q9Y6M4 447 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 HIDE1A8MVS5 230 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 FAM171A2A8MVW0 826 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CD80P33681 288 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GPR143P51810 404 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 BAXQ07812 192 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 C9orf152Q5JTZ5 239 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SUSD1Q6UWL2 747 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 LRRTM1Q86UE6 522 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 NUP43Q8NFH3 380 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 OR8J2Q8NGG1 315 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 POPDC3Q9HBV1 291 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 KCNIP1Q9NZI2 227 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 KLRF1Q9NZS2 232 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GDF2Q9UK05 429 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM150CB9EJG8 249 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 LDB2O43679 373 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RAB40ALP0C0E4 278 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CTRB1P17538 263 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GABRA5P31644 462 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SIM1P81133 766 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GTDC1Q4AE62 458 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ATPAF1Q5TC12 328 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CTRB2Q6GPI1 263 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 MFSD9Q8NBP5 474 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 LFNGQ8NES3 379 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RAB40AQ8WXH6 277 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 CDS1Q92903 461 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 PIGVQ9NUD9 493 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 MROH6A6NGR9 719 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ADAM23O75077 832 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF8P17098 575 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RPS18P62269 152 aaKnown RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TEKQ02763 1124 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 GGNBP1Q5YKI7 109 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ABLIM2Q6H8Q1 611 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 TOMM20LQ6UXN7 152 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 RELL2Q8NC24 303 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 PLA2G15Q8NCC3 412 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ZMYND19Q96E35 227 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 SPATC1LQ9H0A9 340 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 C1GALT1Q9NS00 363 aa8.14□□□□□ -1.11
ATXN3-216ENST00000545170 LYRM2Q9NU23 88 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF724A8MTY0 619 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SOCS7O14512 581 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CFHP08603 1231 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 APEHP13798 732 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PTPN2P17706 415 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 BTG1P62324 171 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CPOQ8IVL8 374 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 OR4K17Q8NGC6 315 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SGK3Q96BR1 496 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MSI2Q96DH6 328 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TSGA13Q96PP4 275 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms