RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 DPH1Q9BZG8 443 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 MMP28Q9H239 520 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 ADAP2Q9NPF8 381 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF275Q9NSD4 429 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 CLDND1Q9NY35 253 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 STMN3Q9NZ72 180 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 PTTG3PQ9NZH4 202 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 SIGLEC7Q9Y286 467 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 CENPFP49454 3210 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 TRPM6Q9BX84 2022 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 TRAV1-2A0A0B4J238 106 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 A0A0J9YY10 115 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 SCO2O43819 266 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 SNAPC5O75971 98 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 LALBAP00709 142 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 SBK2P0C263 348 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 OR2T7P0C7T2 308 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 NPR2P20594 1047 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 NOS3P29474 1203 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 MAT2AP31153 395 aaKnown RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 GPR143P51810 404 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 RAB38P57729 211 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 HSF2Q03933 536 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 MAB21L1Q13394 359 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 TATDN3Q17R31 274 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 PRICKLE4Q2TBC4 344 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 TMEM196Q5HYL7 178 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 IDNKQ5T6J7 187 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF57Q68EA5 555 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 RNF44Q7L0R7 432 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 OAFQ86UD1 273 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 SIRT6Q8N6T7 355 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 AVL9Q8NBF6 648 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 OR10H4Q8NGA5 316 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 OR2T27Q8NH04 317 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 RFT1Q96AA3 541 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 NACC2Q96BF6 587 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 GSDMCQ9BYG8 508 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 PLA2G2FQ9BZM2 168 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 NDEL1Q9GZM8 345 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 AKAP7Q9P0M2 348 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 EXTL2Q9UBQ6 330 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 RBMX2Q9Y388 322 aaKnown RBP12.09□□□□□ -0.47
CPSF7-223ENST00000544669 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
CPSF7-223ENST00000544669 A6NCN8 305 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 SOCS6O14544 535 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 PIP5K1CO60331 668 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 GALR3O60755 368 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 PTP4A3O75365 173 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 TNFP01375 233 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 C1QBP02746 253 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ZGLP1P0C6A0 271 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 TBXA2RP21731 343 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 TGM4P49221 684 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 SRP54P61011 504 aaKnown RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 HOXC5Q00444 222 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ISXQ2M1V0 245 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 CCDC58Q4VC31 144 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 KLHL12Q53G59 568 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 FCRL6Q6DN72 434 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ULK3Q6PHR2 472 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ZFP41Q8N8Y5 198 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ABHD4Q8TB40 342 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ZCCHC10Q8TBK6 192 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 CTHRC1Q96CG8 243 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 KXD1Q9BQD3 176 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 LMF2Q9BU23 707 aaKnown RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 GTPBP2Q9BX10 602 aaKnown RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 HDHD2Q9H0R4 259 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-223ENST00000544669 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 SERTAD3Q9UJW9 196 aa12.08□□□□□ -0.48
CPSF7-223ENST00000544669 ARPC4-TTLL3A0A0A6YYG9 625 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 A0A0B4J2E0 115 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 A0A1B0GX12 115 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 A0A1W2PS29 197 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 OR6C74A6NCV1 312 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CD8B2A6NJW9 211 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 INMT-MINDY4F8WBC2 141 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 H0YGG7 62 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CYR61O00622 381 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 LRRTM2O43300 516 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RASGRP1O95267 797 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CD8BP10966 210 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 PRG2P13727 222 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 DRD1P21728 446 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 GABRA3P34903 492 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 PTGER1P34995 402 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 SOX18P35713 384 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms