RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ZNF264O43296 627 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 FADS1O60427 444 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 TPST1O60507 370 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 TIPRLO75663 272 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 DNAJB5O75953 348 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 CELA2AP08217 269 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 RNF224P0DH78 156 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PRKAR1AP10644 381 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 THRBP10828 461 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 COL8A1P27658 744 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 MSX1P28360 303 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SOX3P41225 446 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 CYB561P49447 251 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SUMO3P55854 103 aaPredicted RBP8.71□□□□□ -1.02
YBX3-215ENST00000544504 COPZ1P61923 177 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 VLDLRP98155 873 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SNCBQ16143 134 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 MAPK14Q16539 360 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 DEFB109BQ30KR1 87 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SLC22A10Q63ZE4 541 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 OR2T5Q6IEZ7 315 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SLC30A6Q6NXT4 461 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 LYPD8Q6UX82 237 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ISLR2Q6UXK2 745 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 OLIG3Q7RTU3 272 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ZAR1Q86SH2 424 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SVOPLQ8N434 492 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 LINC00471Q8N535 108 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SIRT6Q8N6T7 355 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 POGLUT1Q8NBL1 392 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PIK3C3Q8NEB9 887 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 OR2T29Q8NH02 315 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PSMF1Q92530 271 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 HGDQ93099 445 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SDCCAG3Q96C92 435 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 C7orf34Q96L11 122 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.02
YBX3-215ENST00000544504 LMF1Q96S06 567 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PIP5K1AQ99755 562 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 UTP23Q9BRU9 249 aaKnown RBP8.71□□□□□ -1.02
YBX3-215ENST00000544504 LAT2Q9GZY6 243 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 RNF32Q9H0A6 362 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ING2Q9H160 280 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 VCXQ9H320 206 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ANKRD19PQ9H560 264 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 REEP1Q9H902 201 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 LIN28AQ9H9Z2 209 aaKnown RBP8.71□□□□□ -1.02
YBX3-215ENST00000544504 TIMMDC1Q9NPL8 285 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 AGPAT4Q9NRZ5 378 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 STMN3Q9NZ72 180 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 NDUFAF4Q9P032 175 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 KCNE5Q9UJ90 142 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 POLQO75417 2590 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 SETD2Q9BYW2 2564 aaPredicted RBP8.7□□□□□ -1.02
YBX3-215ENST00000544504 NPIPA5A0A0B4J1W7 369 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 TTLL8A6PVC2 850 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 NPIPA7E9PJI5 369 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 MKRN2OSH3BPM6 223 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 hCG_2039718K7EN88 272 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 FAAHO00519 579 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 E2F6O75461 281 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 OR6B1O95007 311 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 SNX4O95219 450 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 OR5F1O95221 314 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 ANGPTL1O95841 491 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 NPIPA8P0DM63 369 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 OR1E2P47887 323 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 FBXW4P57775 412 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 TAS2R41P59536 307 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 ST3GAL3Q11203 375 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 FNDC7Q5VTL7 733 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 DEF8Q6ZN54 512 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 C16orf47Q6ZP98 133 aaPredicted RBP8.7□□□□□ -1.02
YBX3-215ENST00000544504 ASB18Q6ZVZ8 466 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 CYP4Z2PQ8N1L4 340 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 CLIP4Q8N3C7 705 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 OR10Q1Q8NGQ4 319 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 VANGL1Q8TAA9 524 aaPredicted RBP8.7□□□□□ -1.02
YBX3-215ENST00000544504 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 PAQR8Q8TEZ7 354 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 RNF138Q8WVD3 245 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 LRTOMTQ8WZ04 291 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 NRBF2Q96F24 287 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 PRRC1Q96M27 445 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 EPYCQ99645 322 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 MCHR1Q99705 422 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 C9orf16Q9BUW7 83 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 FNDC11Q9BVV2 318 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 OSBPL11Q9BXB4 747 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 AMBRA1Q9C0C7 1298 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 TMEM27Q9HBJ8 222 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 DNAJB12Q9NXW2 375 aaKnown RBP8.7□□□□□ -1.02
YBX3-215ENST00000544504 KLRF1Q9NZS2 232 aa8.7□□□□□ -1.02
YBX3-215ENST00000544504 SELENONQ9NZV5 590 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms