RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF555Q8NEP9 628 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 OR5M3Q8NGP4 307 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 LAT2Q9GZY6 243 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 EXPH5Q8NEV8 1989 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 PTPRZ1P23471 2315 aaPredicted RBP27.88■■■□□ 2.05
CCM2-219ENST00000544363 MASP2O00187 686 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 ITGA10O75578 1167 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 LYPD3O95274 346 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 ADAP00813 363 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 ITGAMP11215 1152 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 RYKP34925 604 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 PGBD2Q6P3X8 592 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 ADAMTS17Q8TE56 1095 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 ACOT11Q8WXI4 607 aaPredicted RBP27.88■■■□□ 2.05
CCM2-219ENST00000544363 NODALQ96S42 347 aa27.88■■■□□ 2.05
CCM2-219ENST00000544363 GPN2Q9H9Y4 310 aaPredicted RBP27.88■■■□□ 2.05
CCM2-219ENST00000544363 A0A0B4J2E0 115 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 A0A1B0GX12 115 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 GNAO1P09471 354 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 Q0VFX4 171 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 RSPO4Q2I0M5 234 aaPredicted RBP27.87■■■□□ 2.05
CCM2-219ENST00000544363 ZNF730Q6ZMV8 503 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 APLFQ8IW19 511 aaPredicted RBP27.87■■■□□ 2.05
CCM2-219ENST00000544363 ARMC10Q8N2F6 343 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 GRHL3Q8TE85 626 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 GTPBP3Q969Y2 492 aaKnown RBP27.87■■■□□ 2.05
CCM2-219ENST00000544363 PRSS27Q9BQR3 290 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 DGCR6LQ9BY27 220 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 RIBC2Q9H4K1 309 aa27.87■■■□□ 2.05
CCM2-219ENST00000544363 YARS2Q9Y2Z4 477 aaKnown RBP27.87■■■□□ 2.05
CCM2-219ENST00000544363 A0A1B0GWA3 101 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 ANGPTL1O95841 491 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 POU2F1P14859 743 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 POLR2IP36954 125 aaKnown RBP27.86■■■□□ 2.05
CCM2-219ENST00000544363 CHAF1BQ13112 559 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 CBLN3Q6UW01 205 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 USP51Q70EK9 711 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 KIAA1143Q96AT1 154 aaPredicted RBP27.86■■■□□ 2.05
CCM2-219ENST00000544363 CDCP1Q9H5V8 836 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 UBAP1Q9NZ09 502 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 PCSK5Q92824 1860 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 CEP250Q9BV73 2442 aa27.86■■■□□ 2.05
CCM2-219ENST00000544363 SLC16A6O15403 523 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 SCO2O43819 266 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 EIF4E2O60573 245 aaKnown RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 LINGO3P0C6S8 592 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 MYF6P23409 242 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 CLK3P49761 638 aaKnown RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 UGT2B15P54855 530 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 LSM11P83369 360 aaKnown RBP eCLIP27.85■■■□□ 2.05
CCM2-219ENST00000544363 CAMK2BQ13554 666 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 ATP1A4Q13733 1029 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 NTRK2Q16620 822 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 RRM2BQ7LG56 351 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 RPS19BP1Q86WX3 136 aaKnown RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 RNF138Q8WVD3 245 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 SPACA9Q96E40 222 aaPredicted RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 IP6K3Q96PC2 410 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 NR1H4Q96RI1 486 aaPredicted RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 GABARAPL3Q9BY60 117 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 LOC100130705A0A1B0GUX0 176 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 CLIC3O95833 236 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 SERPINA7P05543 415 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 LIPCP11150 499 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 IFNGR2P38484 337 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 MLF1P58340 268 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 COPZ1P61923 177 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 ZNF117Q03924 483 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 NPRL3Q12980 569 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 RTP5Q14D33 572 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 TGIF1Q15583 401 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 C1orf94Q6P1W5 598 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 ZER1Q7Z7L7 766 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 PARP8Q8N3A8 854 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 CADM2Q8N3J6 435 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 TMCO5AQ8N6Q1 288 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 TMEM255BQ8WV15 326 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 GRIP2Q9C0E4 1043 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 RYDENQ9NUL5 291 aaKnown RBP27.85■■■□□ 2.05
CCM2-219ENST00000544363 RPS6KB2Q9UBS0 482 aa27.85■■■□□ 2.05
CCM2-219ENST00000544363 ADAM10O14672 748 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 HCRTR2O43614 444 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 CHP2O43745 196 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 NTN1O95631 604 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 SOX3P41225 446 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 CCR4P51679 360 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 ZNF791Q3KP31 576 aaPredicted RBP27.84■■■□□ 2.05
CCM2-219ENST00000544363 FCRLBQ6BAA4 426 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 OPN5Q6U736 354 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 MBOAT2Q6ZWT7 520 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 MISPQ8IVT2 679 aa27.84■■■□□ 2.05
CCM2-219ENST00000544363 MAN1A2O60476 641 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 SLC6A8P48029 635 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 ULK3Q6PHR2 472 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 KLHL17Q6TDP4 642 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 WDR88Q6ZMY6 472 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 RNF217Q8TC41 542 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 SH3YL1Q96HL8 342 aaPredicted RBP27.83■■■□□ 2.05
CCM2-219ENST00000544363 UCK2Q9BZX2 261 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 ENOPH1Q9UHY7 261 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms