RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 REP15Q6BDI9 236 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 SNX32Q86XE0 403 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 PEX5LQ8IYB4 626 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 BBS10Q8TAM1 723 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ZPLD1Q8TCW7 415 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 WDR60Q8WVS4 1066 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ITLN2Q8WWU7 325 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ZG16BQ96DA0 208 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 FAM107BQ9H098 131 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 QRSL1Q9H0R6 528 aaKnown RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 CAMK2AQ9UQM7 478 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 USP9YO00507 2555 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 MRASO14807 208 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 GMFGO60234 142 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 THBS1P07996 1170 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 POU3F2P20265 443 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-216ENST00000543170 PSMA4P25789 261 aaKnown RBP16.62■□□□□ 0.25
COPS7A-216ENST00000543170 CYLC2Q14093 348 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-216ENST00000543170 NDUFAF6Q330K2 333 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 MMEL1Q495T6 779 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 SLC25A53Q5H9E4 307 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 XKRXQ6PP77 449 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 LACC1Q8IV20 430 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 C10orf111Q8N326 155 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 RPRMLQ8N4K4 120 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 TMCO5AQ8N6Q1 288 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 RP9Q8TA86 221 aaKnown RBP16.62■□□□□ 0.25
COPS7A-216ENST00000543170 GPR119Q8TDV5 335 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 PSMG3-AS1Q96PY0 264 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 TTYH2Q9BSA4 534 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 CCDC106Q9BWC9 280 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 ARMCX1Q9P291 453 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 STOML1Q9UBI4 398 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 GPC6Q9Y625 555 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-216ENST00000543170 AP4B1Q9Y6B7 739 aa16.62■□□□□ 0.25
COPS7A-216ENST00000543170 CD8B2A6NJW9 211 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 H0Y3Z8 333 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 FXYD1O00168 92 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 NUDT14O95848 222 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 EPPINO95925 133 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 UBTFL6P0CB48 400 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-216ENST00000543170 IL7RP16871 459 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 TCEA1P23193 301 aaKnown RBP16.61■□□□□ 0.25
COPS7A-216ENST00000543170 RNF144AP50876 292 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-216ENST00000543170 DLX5P56178 289 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 PLAURQ03405 335 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 ZSWIM7Q19AV6 140 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 RNF220Q5VTB9 566 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 NSUN5P2Q63ZY6 315 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 NET1Q7Z628 596 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-216ENST00000543170 MTDHQ86UE4 582 aaKnown RBP16.61■□□□□ 0.25
COPS7A-216ENST00000543170 OR8J3Q8NGG0 315 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 POC1BQ8TC44 478 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 RND1Q92730 232 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 MAL2Q969L2 176 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 UCN2Q96RP3 112 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 MYLK2Q9H1R3 596 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 CALHM2Q9HA72 323 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 ZNF337Q9Y3M9 751 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 COL12A1Q99715 3063 aa16.61■□□□□ 0.25
COPS7A-216ENST00000543170 ICE1Q9Y2F5 2266 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 C5orf58C9J3I9 102 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 NTN1O95631 604 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 GLI4P10075 376 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 ETS2P15036 469 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 PRKCAP17252 672 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 PGCP20142 388 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 TIMP3P35625 211 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 SLC6A8P48029 635 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 STARP49675 285 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 CCR4P51679 360 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 NUP107P57740 925 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 EEFSECP57772 596 aaKnown RBP16.6■□□□□ 0.25
COPS7A-216ENST00000543170 MTPNP58546 118 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 CDK6Q00534 326 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 RBBP4Q09028 425 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 FOXF1Q12946 379 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 RPS26P11Q5JNZ5 115 aaPredicted RBP16.6■□□□□ 0.25
COPS7A-216ENST00000543170 RIPPLY2Q5TAB7 128 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 REEP3Q6NUK4 255 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 NCCRP1Q6ZVX7 275 aaPredicted RBP16.6■□□□□ 0.25
COPS7A-216ENST00000543170 PIGWQ7Z7B1 504 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 MRGPRGQ86SM5 289 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 SERPINA11Q86U17 422 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 GRAMD2AQ8IUY3 354 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 MEIOBQ8N635 442 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 OR52P1PQ8NH57 321 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 ST8SIA1Q92185 356 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 LRRC58Q96CX6 371 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 RNF145Q96MT1 663 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 SH3GL1Q99961 368 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 SPATA9Q9BWV2 254 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 KAT8Q9H7Z6 458 aaKnown RBP16.6■□□□□ 0.25
COPS7A-216ENST00000543170 CACYBPQ9HB71 228 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms