RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 RFPL3SP0C7P2 107 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 UBTFL6P0CB48 400 aaPredicted RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 ZNF17P17021 662 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ME2P23368 584 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 FKBP2P26885 142 aaKnown RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 AQP1P29972 269 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 MAGEA5P43359 124 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 HTR3AP46098 478 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 KCNJ5P48544 419 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 MAP2K6P52564 334 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 DLX5P56178 289 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 PMP22Q01453 160 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 C19orf57Q0VDD7 668 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.07□□□□□ -0.64
DDX55-210ENST00000543016 CMPK2Q5EBM0 449 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 RNFT1Q5M7Z0 435 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 GLYATQ6IB77 296 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 OR5M10Q6IEU7 315 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ARHGAP11AQ6P4F7 1023 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 AAGABQ6PD74 315 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ZNF836Q6ZNA1 936 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 GPR119Q8TDV5 335 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 PIGQQ9BRB3 760 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ASF1BQ9NVP2 202 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 DNAJB12Q9NXW2 375 aaKnown RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 TAS2R10Q9NYW0 307 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 RPS6KA6Q9UK32 745 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 NPIPA1Q9UND3 350 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 SLC9A8Q9Y2E8 581 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 SNX13Q9Y5W8 968 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 RP1L1Q8IWN7 2480 aaPredicted RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 TRGV5A0A0B4J1U4 118 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 AQP7O14520 342 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 ZIC3O60481 467 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 FMO6PO60774 539 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 CYP7B1O75881 506 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 NUDT14O95848 222 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 LGI1O95970 557 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 ACTL6AO96019 429 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 LINGO3P0C6S8 592 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 HK1P19367 917 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 CHMP24386 653 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 RFC3P40938 356 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TDGF1P3P51864 188 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 COPZ1P61923 177 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 SELENOWP63302 87 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 RBPJQ06330 500 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 DMTNQ08495 405 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 CEACAM7Q14002 265 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TRIM25Q14258 630 aaKnown RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 TOMM20Q15388 145 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 CYBRD1Q53TN4 286 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 SLC25A53Q5H9E4 307 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 MTX3Q5HYI7 312 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 NHSL2Q5HYW2 709 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 CBLN3Q6UW01 205 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TRILQ7L0X0 811 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 YTHDF3Q7Z739 585 aaKnown RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 GTPBP8Q8N3Z3 284 aaPredicted RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 TMCO5AQ8N6Q1 288 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 ST6GALNAC3Q8NDV1 305 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 FAM83FQ8NEG4 500 aaPredicted RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 OR14L1PQ8NHC6 308 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 NEIL3Q8TAT5 605 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 FIG4Q92562 907 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 CNOT9Q92600 299 aaKnown RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 PROX1Q92786 737 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 FAM162AQ96A26 154 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TAMM41Q96BW9 452 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 SARAFQ96BY9 339 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 SH3YL1Q96HL8 342 aaPredicted RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 MRGPRX4Q96LA9 322 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 THTPAQ9BU02 230 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 LRMDAQ9H2I8 198 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 LDAHQ9H6V9 325 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 MED17Q9NVC6 651 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 ACTR3BQ9P1U1 418 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 SAMD4AQ9UPU9 718 aaKnown RBP11.06□□□□□ -0.64
DDX55-210ENST00000543016 NTNG1Q9Y2I2 539 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 EML6Q6ZMW3 1958 aa11.06□□□□□ -0.64
DDX55-210ENST00000543016 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 CLDN24A6NM45 220 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 GSC2O15499 205 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 FESP07332 822 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 HOXB6P17509 224 aaKnown RBP11.05□□□□□ -0.64
DDX55-210ENST00000543016 CD247P20963 164 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 MST1P26927 711 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 ELK4P28324 431 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 CCR4P51679 360 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 MLLT10P55197 1068 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 RGS8P57771 180 aaPredicted RBP11.05□□□□□ -0.64
DDX55-210ENST00000543016 EPS8Q12929 822 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 SF3B4Q15427 424 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX55-210ENST00000543016 BCL2A1Q16548 175 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 DUSP7Q16829 419 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 TMEM44Q2T9K0 475 aa11.05□□□□□ -0.64
DDX55-210ENST00000543016 PLPPR5Q32ZL2 321 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms