RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ZNF407Q9C0G0 2248 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 AP3D1O14617 1153 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 ACOT8O14734 319 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 ZNF682O95780 498 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 FESP07332 822 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 ELAVL4P26378 380 aaKnown RBP18.92■□□□□ 0.62
OTUB1-211ENST00000543004 RYKP34925 604 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 ARSKQ6UWY0 536 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 VTCN1Q7Z7D3 282 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 LACC1Q8IV20 430 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 FAM86B1Q8N7N1 296 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 ASB9Q96DX5 294 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 PRR14Q9BWN1 585 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 LAT2Q9GZY6 243 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 GORASP2Q9H8Y8 452 aa18.92■□□□□ 0.62
OTUB1-211ENST00000543004 M0R3H8 397 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 GDF1P27539 372 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 P2RX1P51575 399 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 TOMM20Q15388 145 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 CBLL1Q75N03 491 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 RBM45Q8IUH3 476 aaKnown RBP18.91■□□□□ 0.62
OTUB1-211ENST00000543004 CMIPQ8IY22 773 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 DEFB127Q9H1M4 99 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 ACTR3BQ9P1U1 418 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 POMPQ9Y244 141 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 VDAC3Q9Y277 283 aa18.91■□□□□ 0.62
OTUB1-211ENST00000543004 SVILO95425 2214 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 SHISA8B8ZZ34 492 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 EIF4E2O60573 245 aaKnown RBP18.9■□□□□ 0.62
OTUB1-211ENST00000543004 GMNNO75496 209 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 CBR3O75828 277 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 NUDT14O95848 222 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 LGI1O95970 557 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 PRB1P04280 392 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 ZNF24P17028 368 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 OR1E2P47887 323 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 ERFP50548 548 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 SELENOWP63302 87 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 HYAL4Q2M3T9 481 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 ENPP6Q6UWR7 440 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 VANGL1Q8TAA9 524 aaPredicted RBP18.9■□□□□ 0.62
OTUB1-211ENST00000543004 SNRNP40Q96DI7 357 aaKnown RBP18.9■□□□□ 0.62
OTUB1-211ENST00000543004 NSMCE2Q96MF7 247 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 DCAF13Q9NV06 445 aaKnown RBP18.9■□□□□ 0.62
OTUB1-211ENST00000543004 SH3GLB1Q9Y371 365 aa18.9■□□□□ 0.62
OTUB1-211ENST00000543004 TPST2O60704 377 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 TRAPPC6AO75865 159 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 MST1P26927 711 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 ACAA2P42765 397 aaKnown RBP18.89■□□□□ 0.62
OTUB1-211ENST00000543004 ZNF136P52737 540 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 YRDCQ86U90 279 aaKnown RBP18.89■□□□□ 0.62
OTUB1-211ENST00000543004 SLC22A16Q86VW1 577 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 DHFR2Q86XF0 187 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 GRAMD2AQ8IUY3 354 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 OR5M1Q8NGP8 315 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 OR5W2Q8NH69 310 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 GPR119Q8TDV5 335 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 C1GALT1C1Q96EU7 318 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 RPH3AQ9Y2J0 694 aaPredicted RBP18.89■□□□□ 0.62
OTUB1-211ENST00000543004 LIPGQ9Y5X9 500 aa18.89■□□□□ 0.62
OTUB1-211ENST00000543004 DNAJC13O75165 2243 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ANKUB1A6NFN9 424 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 TFECO14948 347 aaPredicted RBP18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ZNHIT1O43257 154 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 SUV39H1O43463 412 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 IFNA14P01570 189 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 DPP4P27487 766 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 MLLT10P55197 1068 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 NPTX1Q15818 432 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 INAQ16352 499 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 EIPR1Q53HC9 387 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 CMPK2Q5EBM0 449 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 SIAH3Q8IW03 269 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 OR6T1Q8NGN1 323 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 HSH2DQ96JZ2 352 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ARHGDIGQ99819 225 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 EXOSC3Q9NQT5 275 aaKnown RBP18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ASF1BQ9NVP2 202 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 ADPRHL2Q9NX46 363 aa18.89■□□□□ 0.61
OTUB1-211ENST00000543004 CFAP73A6NFT4 308 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 TTLL8A6PVC2 850 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 ZIC3O60481 467 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 PRKD3O94806 890 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 ENDOUP21128 410 aaKnown RBP18.88■□□□□ 0.61
OTUB1-211ENST00000543004 MSX1P28360 303 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 ALDH6A1Q02252 535 aaKnown RBP18.88■□□□□ 0.61
OTUB1-211ENST00000543004 EPS8Q12929 822 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 NRF1Q16656 503 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 WIPI1Q5MNZ9 446 aaPredicted RBP18.88■□□□□ 0.61
OTUB1-211ENST00000543004 LCN8Q6JVE9 175 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 FAM180AQ6UWF9 173 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 FAM109AQ8N4B1 249 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 FAM83FQ8NEG4 500 aaPredicted RBP18.88■□□□□ 0.61
OTUB1-211ENST00000543004 TOR1AIP2Q8NFQ8 470 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 RASSF5Q8WWW0 418 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 MMADHCQ9H3L0 296 aaPredicted RBP18.88■□□□□ 0.61
OTUB1-211ENST00000543004 ARMC7Q9H6L4 198 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 PTGES2Q9H7Z7 377 aa18.88■□□□□ 0.61
OTUB1-211ENST00000543004 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms