RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MAP1BP46821 2468 aaKnown RBP25.48■■□□□ 1.67
CCM2-218ENST00000541586 ARRDC5A6NEK1 342 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 H0YAE9 185 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 REM1O75628 298 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 ANXA8P13928 327 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 IL1RL1Q01638 556 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 PLCXD2Q0VAA5 305 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 GRAMD2AQ8IUY3 354 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 SLC34A3Q8N130 599 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 ADAMTS16Q8TE57 1224 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 TP53INP1Q96A56 240 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 UBQLN4Q9NRR5 601 aa25.48■■□□□ 1.67
CCM2-218ENST00000541586 DNAJB12Q9NXW2 375 aaKnown RBP25.48■■□□□ 1.67
CCM2-218ENST00000541586 ABCB7O75027 752 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 ZFAND5O76080 213 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 UTS2O95399 124 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 CLIC3O95833 236 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 ABCD3P28288 659 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 KCNAB2Q13303 367 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 KLHL26Q53HC5 615 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 ZNF770Q6IQ21 691 aaPredicted RBP25.47■■□□□ 1.67
CCM2-218ENST00000541586 PLEKHM3Q6ZWE6 761 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 APLFQ8IW19 511 aaPredicted RBP25.47■■□□□ 1.67
CCM2-218ENST00000541586 NUBPLQ8TB37 319 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 SNRNP27Q8WVK2 155 aaKnown RBP25.47■■□□□ 1.67
CCM2-218ENST00000541586 OMA1Q96E52 524 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 EVA1AQ9H8M9 152 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 FAM118AQ9NWS6 357 aa25.47■■□□□ 1.67
CCM2-218ENST00000541586 SERINC4A6NH21 518 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 FAAHO00519 579 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 TSPAN2O60636 221 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 IL12BP29460 328 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 KRT20P35900 424 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 TBR1Q16650 682 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 ZSWIM7Q19AV6 140 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 B3GNTL1Q67FW5 361 aaPredicted RBP25.46■■□□□ 1.67
CCM2-218ENST00000541586 CMIPQ8IY22 773 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 OR8K3Q8NH51 312 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 CDCP1Q9H5V8 836 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 DSPP15924 2871 aaKnown RBP25.46■■□□□ 1.67
CCM2-218ENST00000541586 SH3PXD2BA1X283 911 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 CYP7B1O75881 506 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 LCN1P31025 176 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 IFNA8P32881 189 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 POLR2IP36954 125 aaKnown RBP25.46■■□□□ 1.67
CCM2-218ENST00000541586 ST13P50502 369 aaKnown RBP25.46■■□□□ 1.67
CCM2-218ENST00000541586 PSPHP78330 225 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 DESI1Q6ICB0 168 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 PODNL1Q6PEZ8 512 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 C16orf47Q6ZP98 133 aaPredicted RBP25.46■■□□□ 1.67
CCM2-218ENST00000541586 ZNF527Q8NB42 609 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 FDCSPQ8NFU4 85 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 OIT3Q8WWZ8 545 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 NIPSNAP1Q9BPW8 284 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 GPR83Q9NYM4 423 aa25.46■■□□□ 1.67
CCM2-218ENST00000541586 OR5F1O95221 314 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 OXSR1O95747 527 aaPredicted RBP25.45■■□□□ 1.66
CCM2-218ENST00000541586 UBTFL6P0CB48 400 aaPredicted RBP25.45■■□□□ 1.66
CCM2-218ENST00000541586 CYP4B1P13584 511 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 CBLP22681 906 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 MYF6P23409 242 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 HTR2AP28223 471 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 ST3GAL3Q11203 375 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 COL28A1Q2UY09 1125 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 UGT2A3Q6UWM9 527 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 USP51Q70EK9 711 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 AQP11Q8NBQ7 271 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 PSMF1Q92530 271 aa25.45■■□□□ 1.66
CCM2-218ENST00000541586 TESQ9UGI8 421 aaKnown RBP25.45■■□□□ 1.66
CCM2-218ENST00000541586 DOCK10Q96BY6 2186 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 TMEM200CA6NKL6 621 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 WWP2O00308 870 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 FMO6PO60774 539 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 ICOSLGO75144 302 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 GASTP01350 101 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 THY1P04216 161 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 HPGDP15428 266 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 TRAM2Q15035 370 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 TTC23Q5W5X9 447 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 JMJD6Q6NYC1 403 aaPredicted RBP25.44■■□□□ 1.66
CCM2-218ENST00000541586 ZNF555Q8NEP9 628 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 OR5L2Q8NGL0 311 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 ARSGQ96EG1 525 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 SLC41A3Q96GZ6 507 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 RIBC2Q9H4K1 309 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 PRORYQ9H606 182 aa25.44■■□□□ 1.66
CCM2-218ENST00000541586 SCDO00767 359 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 OR10H3O60404 316 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 CSTAP01040 98 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 CDH2P19022 906 aaPredicted RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 TBXA2RP21731 343 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 PNLIPRP2P54317 469 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 NRG3P56975 720 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 GDF7Q7Z4P5 450 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 RPS19BP1Q86WX3 136 aaKnown RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 SLC35B4Q969S0 331 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 POLR2J2Q9GZM3 115 aaKnown RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 POLR2J3Q9H1A7 115 aaKnown RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 ANKRD19PQ9H560 264 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 ZNF556Q9HAH1 456 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms