RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NUDT19A8MXV4 375 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 FADS1O60427 444 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 CAV2P51636 162 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 GP2P55259 537 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 HTR4Q13639 388 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 TMEM244Q5VVB8 128 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 OR4F15Q8NGB8 312 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 DYNC2LI1Q8TCX1 351 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 TEPSINQ96N21 525 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 ZNF582Q96NG8 517 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 CNTNAP3Q9BZ76 1288 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 HRH4Q9H3N8 390 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 SPHK2Q9NRA0 654 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 GMPR2Q9P2T1 348 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC22A23A1A5C7 686 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 CR2P20023 1033 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 M6PRP20645 277 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RNF113BQ8IZP6 322 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 OR52N1Q8NH53 320 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RRNAD1Q96FB5 475 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 ZNF442Q9H7R0 627 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 MN1Q10571 1320 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 A0A1B0GV50 99 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 TSPAN11A1L157 253 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 A6NIZ1 184 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 MED6O75586 246 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 GJA1P17302 382 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RAP1BP61224 184 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RAP1AP62834 184 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RPS21P63220 83 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 CTSL3PQ5NE16 218 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 OR5M11Q96RB7 305 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 SERINC2Q96SA4 455 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 PGAP2Q9UHJ9 254 aa14.06□□□□□ -0.16
SMARCA4-207ENST00000541122 RPS10-NUDT3A0A1W2PQS6 291 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 CASRP41180 1078 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 RPS10P46783 165 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 GALK2Q01415 458 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ARHGAP19Q14CB8 494 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SGCAQ16586 387 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 PKDCCQ504Y2 493 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 LILRB2Q8N423 598 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 FIBINQ8TAL6 211 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ARRDC2Q8TBH0 407 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 DAZLQ92904 295 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC25A31Q9H0C2 315 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 QRSL1Q9H0R6 528 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 NRIP3Q9NQ35 241 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SMCO4Q9NRQ5 59 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 HRASLS2Q9NWW9 162 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 KCNS2Q9ULS6 477 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 CA5BQ9Y2D0 317 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ZNF175Q9Y473 711 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 C9J4A7 227 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 E9PI62 339 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 FUT1P19526 365 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC6A8P48029 635 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 RSU1Q15404 277 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 PIP5KL1Q5T9C9 394 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 NIPAL3Q6P499 406 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 GDPD3Q7L5L3 318 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 BPIFB2Q8N4F0 458 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC25A46Q96AG3 418 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 INTS14Q96SY0 518 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 DHRS9Q9BPW9 319 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ETV7Q9Y603 341 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 KNG1P01042 644 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 HMGN2P05204 90 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 CSNK1A1LQ8N752 337 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 BOLLQ8N9W6 283 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 PIGMQ9H3S5 423 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 PTGESO14684 152 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ADAM23O75077 832 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 NCR1O76036 304 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ATXN1LP0C7T5 689 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC2A5P22732 501 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 THBS2P35442 1172 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 P2RY14Q15391 338 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 NXNL2Q5VZ03 156 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 CNKSR3Q6P9H4 555 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 ZNF280BQ86YH2 543 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 NEIL2Q969S2 332 aa14.05□□□□□ -0.16
SMARCA4-207ENST00000541122 FOXE1O00358 373 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 OR7A17O14581 309 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 KCNK5O95279 499 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 ELAVL3Q14576 367 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 TEAD2Q15562 447 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 CCL14Q16627 93 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 FCRLAQ7L513 359 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 GKN2Q86XP6 184 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 OR51L1Q8NGJ5 315 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
SMARCA4-207ENST00000541122 DUSP19Q8WTR2 217 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms