RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RPS26P62854 115 aaKnown RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 ALDH6A1Q02252 535 aaKnown RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 MVKQ03426 396 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 NPRL3Q12980 569 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ATP1A4Q13733 1029 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TUBA3CQ13748 450 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TRAM2Q15035 370 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GPR19Q15760 415 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TMEM44Q2T9K0 475 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 PRICKLE4Q2TBC4 344 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CYP27C1Q4G0S4 372 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ZNF691Q5VV52 312 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 LCN10Q6JVE6 187 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CD300LDQ6UXZ3 194 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 QSOX2Q6ZRP7 698 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ZADH2Q8N4Q0 377 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ARHGEF39Q8N4T4 335 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 SVOPQ8N4V2 548 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 SMYD1Q8NB12 490 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ZNF527Q8NB42 609 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 OR51Q1Q8NH59 317 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GPR151Q8TDV0 419 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ADAMTS16Q8TE57 1224 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 SLC9A6Q92581 669 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 HOXB13Q92826 284 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 DAZLQ92904 295 aaKnown RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 ZNF566Q969W8 418 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 LMF2Q9BU23 707 aaKnown RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 GPR87Q9BY21 358 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ALOXE3Q9BYJ1 711 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GRIP2Q9C0E4 1043 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 SAP130Q9H0E3 1048 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 RIBC2Q9H4K1 309 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CXorf21Q9HAI6 301 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 NMNAT1Q9HAN9 279 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 ACER3Q9NUN7 267 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 IMPAD1Q9NX62 359 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 UBAP1Q9NZ09 502 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 SELENONQ9NZV5 590 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ST6GALNAC2Q9UJ37 374 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 ACAD8Q9UKU7 415 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 PLEKHA6Q9Y2H5 1048 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TESMINQ9Y4I5 508 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 U3KQV3 271 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 HRNRQ86YZ3 2850 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 DSPPQ9NZW4 1301 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GTF3C1Q12789 2109 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IGHV5-51A0A0C4DH38 117 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IRGMA1A4Y4 181 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SH3D21A4FU49 640 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 DPPA5A6NC42 116 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 TRIM64A6NGJ6 449 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 AGAP5A6NIR3 686 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 TRIM64CA6NLI5 447 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 OR6C76A6NM76 312 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 DLGAP1O14490 977 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 FOXS1O43638 330 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 FGF17O60258 216 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 WISP2O76076 250 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IFNA16P05015 189 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 FBLP22087 321 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 EEF1B2P24534 225 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 TRHRP34981 398 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 RORAP35398 523 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SEPHS1P49903 392 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 RGS8P57771 180 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 TAS2R41P59536 307 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 RPS15P62841 145 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 MYBPC1Q00872 1141 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IL5RAQ01344 420 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IL1RL1Q01638 556 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 OCA2Q04671 838 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF155Q12901 538 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 IL11RAQ14626 422 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SYPL1Q16563 259 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 DUSP7Q16829 419 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 IQCCQ4KMZ1 466 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 FGD3Q5JSP0 725 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 C6orf141Q5SZD1 244 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 DCST2Q5T1A1 773 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 RNF220Q5VTB9 566 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 MLIPQ5VWP3 458 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF324BQ6AW86 544 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 TBPL2Q6SJ96 375 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF550Q7Z398 422 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 P3H2Q8IVL5 708 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 CDK20Q8IZL9 346 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 RNF113BQ8IZP6 322 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 CIARTQ8N365 385 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 OR7G2Q8NG99 324 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 OR4C15Q8NGM1 316 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 OR14A16Q8NHC5 309 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 KAT2AQ92830 837 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 MYDGFQ969H8 173 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ANKRD9Q96BM1 317 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms