RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CD82P27701 267 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 HTR2AP28223 471 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 STAT5AP42229 794 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 KCNAB2Q13303 367 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 DNASE1L3Q13609 305 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 EFR3AQ14156 821 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 SEC23BQ15437 767 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 PLAG1Q6DJT9 500 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 KRT80Q6KB66 452 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 PODNL1Q6PEZ8 512 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF440Q8IYI8 595 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 FAM71CQ8NEG0 241 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 M1APQ8TC57 530 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC41A3Q96GZ6 507 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 PRR14Q9BWN1 585 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 MMP25Q9NPA2 562 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 ASCL3Q9NQ33 180 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 PNPLA3Q9NST1 481 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 UBAP1Q9NZ09 502 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 NDUFA13Q9P0J0 144 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 MGAT4BQ9UQ53 548 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 NPFFR2Q9Y5X5 522 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 OR10H3O60404 316 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 RAD1O60671 282 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 UGT2B11O75310 529 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 PPM1BO75688 479 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 C1QL1O75973 258 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 NADKO95544 446 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 PRG2P13727 222 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 ENDOUP21128 410 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 ACAA2P42765 397 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 GABREP78334 506 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 BTBD16Q32M84 506 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 LRRC69Q6ZNQ3 347 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 GALNT5Q7Z7M9 940 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 AMER2Q8N7J2 671 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 AQP11Q8NBQ7 271 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 UBL7Q96S82 380 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 NIPSNAP1Q9BPW8 284 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 DGCR6LQ9BY27 220 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 DEFB126Q9BYW3 111 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 TMEM27Q9HBJ8 222 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 MYOTQ9UBF9 498 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 ENOPH1Q9UHY7 261 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 NTNG1Q9Y2I2 539 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
CYB561A3-216ENST00000540755 SETXQ7Z333 2677 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 NSG1A0A0A6YYJ2 146 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 ALG1L2C9J202 215 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 E9PQ18 207 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 H3BNH8 94 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 GASTP01350 101 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 THY1P04216 161 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 PRB1P04280 392 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 UBTFL6P0CB48 400 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 IL1RL1Q01638 556 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 NPRL3Q12980 569 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 IL18R1Q13478 541 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 PGBD2Q6P3X8 592 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC15A4Q8N697 577 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 LSMEM1Q8N8F7 131 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 OR4K5Q8NGD3 323 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC22A8Q8TCC7 542 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 ACOT11Q8WXI4 607 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 FAM192AQ9GZU8 254 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 RIBC2Q9H4K1 309 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 LIN28AQ9H9Z2 209 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
CYB561A3-216ENST00000540755 A0A087WUU8 490 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 A0A0B4J2E0 115 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 A0A1B0GX12 115 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms