RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SAP130Q9H0E3 1048 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 SLC38A1Q9H2H9 487 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 RUBCNLQ9H714 662 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 AP4B1Q9Y6B7 739 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 LRBAP50851 2863 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 H3BNH8 94 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 LINC01387J3KSC0 135 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 GTPBP1O00178 669 aaKnown RBP13.55□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF264O43296 627 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 NUDT14O95848 222 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 AGR2O95994 175 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 ETFAP13804 333 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-212ENST00000540230 CAPN3P20807 821 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 STX1BP61266 288 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 SKP2Q13309 424 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 C6orf10Q5SRN2 563 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 MSANTD1Q6ZTZ1 278 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF619Q8N2I2 560 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 TMCO5AQ8N6Q1 288 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 METTL25Q8N6Q8 603 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 FNDC9Q8TBE3 224 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 GPR119Q8TDV5 335 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 ITCHQ96J02 903 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 ADGRG7Q96K78 797 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 TM9SF2Q99805 663 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 PAIP1Q9H074 479 aaKnown RBP13.55□□□□□ -0.24
UBE3B-212ENST00000540230 NPHS2Q9NP85 383 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 CCDC167Q9P0B6 97 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 DCTN4Q9UJW0 460 aa13.55□□□□□ -0.24
UBE3B-212ENST00000540230 SLC22A20A6NK97 555 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 EIF1AYO14602 144 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 CYP7B1O75881 506 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 ANP32DO95626 131 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 UBTFL6P0CB48 400 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 ZCCHC18P0CG32 403 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 ASCL1P50553 236 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 CCR4P51679 360 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 FGFBP1Q14512 234 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 PON3Q15166 354 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 FBXO27Q8NI29 283 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 RMND5AQ9H871 391 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 TPT1P8Q9HAU6 139 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 HHATLQ9HCP6 504 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 PCDHB14Q9Y5E9 798 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 A0A0J9YW62 118 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 NR5A2O00482 541 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 TNFSF11O14788 317 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 EEF1E1O43324 174 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 EIF4E2O60573 245 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 ADAM11O75078 769 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 TNFSF13O75888 250 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 AQP8O94778 261 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 CSTAP01040 98 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 GUSBP08236 651 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 PRKCAP17252 672 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 PGM1P36871 562 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 SLC6A8P48029 635 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 SUMO3P55854 103 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 KRTAP10-9P60411 292 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 RAC1P63000 192 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 QPRTQ15274 297 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 PAGE3Q5JUK9 113 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 CHMP1BQ7LBR1 199 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 P4HA3Q7Z4N8 544 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 MSRB3Q8IXL7 192 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 FAM71CQ8NEG0 241 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 OR5W2Q8NH69 310 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 OR10D3Q8NH80 312 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 THUMPD3Q9BV44 507 aaKnown RBP13.54□□□□□ -0.24
UBE3B-212ENST00000540230 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 POLE3Q9NRF9 147 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 SLC25A37Q9NYZ2 338 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 JKAMPQ9P055 326 aa13.54□□□□□ -0.24
UBE3B-212ENST00000540230 A0A1W2PNV4 684 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 CXCL13O43927 109 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 NTN1O95631 604 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 KRT75O95678 551 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 IL18BPO95998 194 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 UQCRC1P31930 480 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 SFTPDP35247 375 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 OPRM1P35372 400 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 HPCAP84074 193 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 FBXL19-AS1Q494R0 122 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 AGKQ53H12 422 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 VWA1Q6PCB0 445 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
UBE3B-212ENST00000540230 SPDL1Q96EA4 605 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms