RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 POLDIP3Q9BY77 421 aaKnown RBP20.65■□□□□ 0.9
HOMER3-204ENST00000539827 WWTR1Q9GZV5 400 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 HOXD1Q9GZZ0 328 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 R4GN57 208 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 UNC119BA6NIH7 251 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 H3BMQ9 156 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 CHP2O43745 196 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 CNOT3O75175 753 aaKnown RBP20.64■□□□□ 0.89
HOMER3-204ENST00000539827 LCKP06239 509 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 FGF5P12034 268 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 PSMB9P28065 219 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 MLLT10P55197 1068 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 DCAF7P61962 342 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 PRKCDQ05655 676 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 ZFP36L1Q07352 338 aaKnown RBP20.64■□□□□ 0.89
HOMER3-204ENST00000539827 LSAMPQ13449 338 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 CD226Q15762 336 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 TMEM201Q5SNT2 666 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 OR4Q3Q8NH05 313 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF420Q8TAQ5 688 aaPredicted RBP20.64■□□□□ 0.89
HOMER3-204ENST00000539827 COG8Q96MW5 612 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 AKIRIN1Q9H9L7 192 aaPredicted RBP20.64■□□□□ 0.89
HOMER3-204ENST00000539827 UBQLN4Q9NRR5 601 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 RPS6KB2Q9UBS0 482 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 IL20RAQ9UHF4 553 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 MYO15AQ9UKN7 3530 aa20.64■□□□□ 0.89
HOMER3-204ENST00000539827 OIP5O43482 229 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ALOX12BO75342 701 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ATE1O95260 518 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 CCL4P13236 92 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 HPGDP15428 266 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 KIRREL2Q6UWL6 708 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 APOOLQ6UXV4 268 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF620Q6ZNG0 422 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 CACTIN-AS1Q8N1I8 211 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 Q96MT0 163 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 MRTO4Q9UKD2 239 aaKnown RBP20.63■□□□□ 0.89
HOMER3-204ENST00000539827 MED31Q9Y3C7 131 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF701M0R085 212 aaPredicted RBP20.63■□□□□ 0.89
HOMER3-204ENST00000539827 SCDO00767 359 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ADRA2AP08913 450 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 EMP2P54851 167 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 TRA2AQ13595 282 aaKnown RBP eCLIP20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ALG10BQ5I7T1 473 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 SLC30A6Q6NXT4 461 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 LSMEM1Q8N8F7 131 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF527Q8NB42 609 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 AGBL5Q8NDL9 886 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 PHOSPHO1Q8TCT1 267 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 OSTF1Q92882 214 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 SLC35B4Q969S0 331 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 SAMD8Q96LT4 415 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 DOK1Q99704 481 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 FUNDC2Q9BWH2 189 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 SLC35A3Q9Y2D2 325 aa20.63■□□□□ 0.89
HOMER3-204ENST00000539827 EFCAB10A6NFE3 127 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 GNB5O14775 395 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 NOL3O60936 208 aaKnown RBP20.62■□□□□ 0.89
HOMER3-204ENST00000539827 TRMUO75648 421 aaKnown RBP20.62■□□□□ 0.89
HOMER3-204ENST00000539827 RFPL3O75679 317 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 CH25HO95992 272 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF28P17035 718 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 CALRP27797 417 aaKnown RBP20.62■□□□□ 0.89
HOMER3-204ENST00000539827 GPR143P51810 404 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 OCLNQ16625 522 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 FNDC7Q5VTL7 733 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 MEPEQ9NQ76 525 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-204ENST00000539827 IL20Q9NYY1 176 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 CDH10Q9Y6N8 788 aa20.62■□□□□ 0.89
HOMER3-204ENST00000539827 VSTM2BA6NLU5 285 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 TMX2-CTNND1H3BSU7 103 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 MEN1O00255 615 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 ICOSLGO75144 302 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 ONECUT2O95948 504 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 ZNF883P0CG24 379 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 NR4A1P22736 598 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 IL12BP29460 328 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 EFNB1P98172 346 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 IL11RAQ14626 422 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 SYT6Q5T7P8 510 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-204ENST00000539827 MRGPREQ86SM8 312 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 FAM26EQ8N5C1 309 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 BMPERQ8N8U9 685 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 METTL21AQ8WXB1 218 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 BPIFA2Q96DR5 249 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 LOXL4Q96JB6 756 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 HS6ST2Q96MM7 605 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 SH3GL3Q99963 347 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 TAS2R16Q9NYV7 291 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 CNOT2Q9NZN8 540 aaKnown RBP20.61■□□□□ 0.89
HOMER3-204ENST00000539827 GPR52Q9Y2T5 361 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 LNP1A1A4G5 178 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 OR6C76A6NM76 312 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 SLC15A1P46059 708 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 TMBIM6P55061 237 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 PLCXD2Q0VAA5 305 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 DBX2Q6ZNG2 339 aa20.61■□□□□ 0.89
HOMER3-204ENST00000539827 BPHLQ86WA6 291 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-204ENST00000539827 ERI1Q8IV48 349 aaKnown RBP20.61■□□□□ 0.89
HOMER3-204ENST00000539827 CDK20Q8IZL9 346 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms