RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 BMP8BP34820 402 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 FOXK2Q01167 660 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF750Q32MQ0 723 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 FAM69AQ5T7M9 428 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZCCHC12Q6PEW1 402 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ARL9Q6T311 187 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 OR10H4Q8NGA5 316 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 OR11H7Q8NGC8 314 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 YIPF5Q969M3 257 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 DEFB118Q96PH6 123 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 CACNG6Q9BXT2 260 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF350Q9GZX5 532 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 LRRN3Q9H3W5 708 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SLC6A20Q9NP91 592 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 KCNN3Q9UGI6 736 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TMA7Q9Y2S6 64 aaKnown RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 MEIKINA0A087WXM9 373 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 C4orf51C9J302 202 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 BTN3A3O00478 584 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ASGR2P07307 311 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF3P17036 446 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 TYRP1P17643 537 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 UQCRC1P31930 480 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ACTA2P62736 377 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ACTG2P63267 376 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ACSM3Q53FZ2 586 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF425Q6IV72 752 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 OVCH1Q7RTY7 1134 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 TMEM99Q8N816 258 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 SLC16A11Q8NCK7 471 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 OR52E1Q8NGJ3 308 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 OR4C6Q8NH72 309 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 RPLP0P6Q8NHW5 317 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 MRPL48Q96GC5 212 aaKnown RBP12.31□□□□□ -0.44
UBE3B-209ENST00000539584 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 C10orf90Q96M02 699 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 NRTNQ99748 197 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 MRI1Q9BV20 369 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 ERVMER34-1Q9H9K5 563 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 GLTPQ9NZD2 209 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 DPP7Q9UHL4 492 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 HCFC2Q9Y5Z7 792 aa12.31□□□□□ -0.44
UBE3B-209ENST00000539584 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 IFNGP01579 166 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SULT1A3P0DMM9 295 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SULT1A4P0DMN0 295 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 NID1P14543 1247 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 ERVFC1P60507 584 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 RPS15AP62244 130 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF613Q6PF04 617 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 OR4K14Q8NGD5 310 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 NT5CQ8TCD5 201 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 PTP4A1Q93096 173 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SDF2Q99470 211 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 DPH1Q9BZG8 443 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 PPIL3Q9H2H8 161 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 POLE3Q9NRF9 147 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SLCO1C1Q9NYB5 712 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 IL20RAQ9UHF4 553 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SPATA2Q9UM82 520 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 MED31Q9Y3C7 131 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 PRR19A6NJB7 356 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 ZSCAN5BA6NJL1 495 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 OGG1O15527 345 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 FLRT2O43155 660 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 IFI30P13284 250 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 LAMP2P13473 410 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 PRG2P13727 222 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SLC2A5P22732 501 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 TLX1P31314 330 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 FXYD6P3P58550 94 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 AP3S2P59780 193 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 TNFRSF17Q02223 184 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SNTA1Q13424 505 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 SNTB2Q13425 540 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 GRK1Q15835 563 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 RPE65Q16518 533 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 TCEAL5Q5H9L2 206 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms