RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 EMDP50402 254 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 PGDP52209 483 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 VWA2Q5GFL6 755 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZC3H14Q6PJT7 736 aaKnown RBP15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 COX18Q8N8Q8 333 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 AQP11Q8NBQ7 271 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 PSD4Q8NDX1 1056 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR6T1Q8NGN1 323 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 SETD6Q8TBK2 473 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 CCDC74BQ96LY2 380 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 OPALINQ96PE5 141 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR6C1Q96RD1 312 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 TMEM246Q9BRR3 403 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 CNPPD1Q9BV87 410 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 PINK1Q9BXM7 581 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 DUSP22Q9NRW4 184 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 ENOPH1Q9UHY7 261 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 ASCC3Q8N3C0 2202 aaKnown RBP15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPR179Q6PRD1 2367 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 GXYLT2A0PJZ3 443 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 CENPXA8MT69 81 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 IFI6P09912 130 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ANKRD34CP0C6C1 535 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 CHMP24386 653 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 HMGA2P52926 109 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF155Q12901 538 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPR50Q13585 617 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 MINDY4Q4G0A6 757 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 DCST2Q5T1A1 773 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZCCHC12Q6PEW1 402 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 KLHL17Q6TDP4 642 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR52P1PQ8NH57 321 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ATOH1Q92858 354 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 MTHFD2LQ9H903 347 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 NMNAT1Q9HAN9 279 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 KCND3Q9UK17 655 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ERVK-19Q9WJR5 959 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 DTX4Q9Y2E6 619 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPR55Q9Y2T6 319 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 GRIP1Q9Y3R0 1128 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 CENPVL1A0A0U1RR11 272 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 A0A1B0GX78 115 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 FRS3O43559 492 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 FBLP22087 321 aaKnown RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 EFNA3P52797 238 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 PSG6Q00889 435 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 PIN1Q13526 163 aaPredicted RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 DSG2Q14126 1118 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPR68Q15743 365 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 FIGNL1Q6PIW4 674 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 NEDD4LQ96PU5 975 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 STACQ99469 402 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 PRR14Q9BWN1 585 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 ASPNQ9BXN1 380 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 EXOSC4Q9NPD3 245 aaKnown RBP15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 R4GN57 208 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 FER1L5A0AVI2 2057 aa15.8■□□□□ 0.12
PCDHB17P-201ENST00000539533 AP3D1O14617 1153 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 RGS5O15539 181 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 CYP7B1O75881 506 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 TIAF1O95411 115 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 GASTP01350 101 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 RPS19P39019 145 aaKnown RBP15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 CRISP1P54107 249 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 GNG2P59768 71 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 RFPL4BQ6ZWI9 263 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 PRSS58Q8IYP2 241 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 SLC38A9Q8NBW4 561 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 TSLPQ969D9 159 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR1F2PQ96R84 312 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 BARHL1Q9BZE3 327 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 FOLH1BQ9HBA9 442 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 HHATLQ9HCP6 504 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 A4GNTQ9UNA3 340 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 SLC9A8Q9Y2E8 581 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 TRBV4-1A0A0J9YWV2 114 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 UGT2B17O75795 530 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 SCG5P05408 212 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 PIPP12273 146 aaPredicted RBP15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 TNNI3P19429 210 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 POU1F1P28069 291 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 ACY1Q03154 408 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 ARHGAP40Q5TG30 622 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF517Q6ZMY9 492 aaPredicted RBP15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 BMP8AQ7Z5Y6 402 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 LAPTM4BQ86VI4 370 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR4N2Q8NGD1 307 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF350Q9GZX5 532 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 CTPS2Q9NRF8 586 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 PLSCR3Q9NRY6 295 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 PCDHGB2Q9Y5G2 931 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 V9GYH0 126 aa15.79■□□□□ 0.12
PCDHB17P-201ENST00000539533 NPIPA5A0A0B4J1W7 369 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 NPIPA7E9PJI5 369 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 NKX2-2O95096 273 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 NPIPA8P0DM63 369 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SOX3P41225 446 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 RFX2P48378 723 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SERTAD2Q14140 314 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms