RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 GPR68Q15743 365 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PDZK1Q5T2W1 519 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 HHATQ5VTY9 493 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ATP6V1C2Q8NEY4 427 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OR8J2Q8NGG1 315 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GPR119Q8TDV5 335 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OSTF1Q92882 214 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF524Q96C55 264 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZC3HAV1LQ96H79 300 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GMPPAQ96IJ6 420 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KLHL4Q9C0H6 718 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 HAO1Q9UJM8 370 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PCDHGB4Q9UN71 923 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ESPNB1AK53 854 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C16orf97H3BN30 126 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF195O14628 629 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ANKRD28O15084 1053 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SIAH2O43255 324 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SCN2BO60939 215 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SS18L1O75177 396 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PCYT1AP49585 367 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CCR4P51679 360 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SUMO3P55854 103 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CARD18P57730 90 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SPANXN4Q5MJ08 99 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PDSS1Q5T2R2 415 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ANKRD34AQ69YU3 496 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CROCCP2Q86T23 111 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CHDHQ8NE62 594 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OR6K3Q8NGY3 331 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MGARPQ8TDB4 240 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ROBO4Q8WZ75 1007 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ARSGQ96EG1 525 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OR51I1Q9H343 314 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MEAF6Q9HAF1 191 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF226Q9NYT6 803 aa17.06■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CENPVL1A0A0U1RR11 272 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PRSS51A0A1B0GVH4 220 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 DUXAA6NLW8 204 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 DEFB108AA8MXU0 73 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 FCMRO60667 390 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OR12D1P0DN82 309 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 UBL4AP11441 157 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ELK4P28324 431 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 WDR4P57081 412 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 DEFB113Q30KQ7 82 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TMEM176BQ3YBM2 270 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ANXA8L1Q5VT79 327 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C22orf34Q6ZV56 151 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C16orf62Q7Z3J2 963 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TESCQ96BS2 214 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MBD6Q96DN6 1003 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ALPK1Q96QP1 1244 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SRXN1Q9BYN0 137 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 NMUR2Q9GZQ4 415 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PLSCR4Q9NRQ2 329 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KCNE5Q9UJ90 142 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MKLN1Q9UL63 735 aa17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GPC6Q9Y625 555 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TMEM120BA0PK00 339 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SERINC4A6NH21 518 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C9JVG2 144 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF264O43296 627 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 STX11O75558 287 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CYP7B1O75881 506 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 AK1P00568 194 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TUBBP07437 444 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ALDOCP09972 364 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CD99P14209 185 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PRKCAP17252 672 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 UQCRC2P22695 453 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ADH6P28332 368 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CLNS1AP54105 237 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 QPRTQ15274 297 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ARHGAP11BQ3KRB8 267 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 FAM174BQ3ZCQ3 159 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TGIF2LYQ8IUE0 185 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 VPS37AQ8NEZ2 397 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 XAGE5Q8WWM1 108 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 RAB8BQ92930 207 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PIK3IP1Q96FE7 263 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TEX37Q96LM6 180 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF350Q9GZX5 532 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C12orf49Q9H741 205 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MARCOQ9UEW3 520 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ITPR3Q14573 2671 aa17.04■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GJE1A6NN92 205 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 E9PBE3 544 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SDHDO14521 159 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 EIF4E2O60573 245 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 UGT2B17O75795 530 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 C1QCP02747 245 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CRYGSP22914 178 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 S100A3P33764 101 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 RIPPLY3P57055 190 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 UFM1P61960 85 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PPP2R2AP63151 447 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms