RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 COL4A2P08572 1712 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 HLA-DPB1P04440 258 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 THEGLP0DJG4 465 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 RAB38P57729 211 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 AMZ1Q400G9 498 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 NCCRP1Q6ZVX7 275 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-204ENST00000538492 GID4Q8IVV7 300 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 CDK20Q8IZL9 346 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 TMEM99Q8N816 258 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 AP3S1Q92572 193 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 TOE1Q96GM8 510 aaKnown RBP23.04■■□□□ 1.28
RAB40C-204ENST00000538492 MED31Q9Y3C7 131 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 PCDHGB2Q9Y5G2 931 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 A0A0C4DFX4 3053 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 VCANP13611 3396 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 J3QRE1 110 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 ADAM11O75078 769 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 REM1O75628 298 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 BMP8BP34820 402 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 FZD2Q14332 565 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 PYDC2Q56P42 97 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 MEPCEQ7L2J0 689 aaKnown RBP23.04■■□□□ 1.28
RAB40C-204ENST00000538492 BMP8AQ7Z5Y6 402 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 GATAD2AQ86YP4 633 aa23.04■■□□□ 1.28
RAB40C-204ENST00000538492 C8orf33Q9H7E9 229 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-204ENST00000538492 SPTY2D1-AS1A0A0U1RR47 76 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 B4DGG1 531 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 HRKO00198 91 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 DYRK3O43781 588 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 ATXN8OSP0DMR3 200 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 RPS7P62081 194 aaKnown RBP23.03■■□□□ 1.28
RAB40C-204ENST00000538492 PRPF38BQ5VTL8 546 aaKnown RBP23.03■■□□□ 1.28
RAB40C-204ENST00000538492 AGAP6Q5VW22 663 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 ARMC6Q6NXE6 501 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 XKRXQ6PP77 449 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 LNX2Q8N448 690 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 ACBD7Q8N6N7 88 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 FAM181AQ8N9Y4 354 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 AVL9Q8NBF6 648 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 GALNT6Q8NCL4 622 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 AGAP4Q96P64 663 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 OR51V1Q9H2C8 321 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 HCN3Q9P1Z3 774 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 A0A0A6YYC8 382 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-204ENST00000538492 I3L1I5 382 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-204ENST00000538492 CSF3P09919 207 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 EMDP50402 254 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 PSG6Q00889 435 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 FOXK2Q01167 660 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 CSTF1Q05048 431 aaKnown RBP23.03■■□□□ 1.28
RAB40C-204ENST00000538492 SCN1BQ07699 218 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 Q6ZS52 159 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 TMEM27Q9HBJ8 222 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 FLRT3Q9NZU0 649 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 MALT1Q9UDY8 824 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 SIGLEC7Q9Y286 467 aa23.03■■□□□ 1.28
RAB40C-204ENST00000538492 OR2W5A6NFC9 320 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 NKX2-2O95096 273 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 AK1P00568 194 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 SLC35E2P0CK97 266 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 CCINQ13939 588 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 GARNL3Q5VVW2 1013 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 SLC37A3Q8NCC5 494 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 PTP4A1Q93096 173 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 ALG8Q9BVK2 526 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 NDRG2Q9UN36 371 aaKnown RBP23.02■■□□□ 1.28
RAB40C-204ENST00000538492 SIRT4Q9Y6E7 314 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-204ENST00000538492 OR5K4A6NMS3 321 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 TFECO14948 347 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-204ENST00000538492 FMO6PO60774 539 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 RCBTB2O95199 551 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 MRPL3P09001 348 aaKnown RBP23.02■■□□□ 1.28
RAB40C-204ENST00000538492 ACSM1Q08AH1 577 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 TMPRSS11FQ6ZWK6 438 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 UTS2BQ765I0 119 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 UBE2J2Q8N2K1 259 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 SLC44A3Q8N4M1 653 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 OR10H4Q8NGA5 316 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 ABHD8Q96I13 439 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 GPR174Q9BXC1 333 aa23.02■■□□□ 1.28
RAB40C-204ENST00000538492 POLR1CO15160 346 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 HPGDSO60760 199 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 CLUP10909 449 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 DRD5P21918 477 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 NOS3P29474 1203 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 ERV3-1Q14264 604 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 CYB561A3Q8NBI2 242 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 SMAP2Q8WU79 429 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 KISS1RQ969F8 398 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 TIMP4Q99727 224 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 RBMX2Q9Y388 322 aaKnown RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 LAMA1P25391 3075 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 FAM86C2PA6NEL3 165 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 HYAL3O43820 417 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 CCNKO75909 580 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 IGKV1D-16P01601 117 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 GPR50Q13585 617 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 KIAA0895LQ68EN5 471 aa23.01■■□□□ 1.27
RAB40C-204ENST00000538492 ZNF517Q6ZMY9 492 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-204ENST00000538492 TMEM91Q6ZNR0 172 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms