RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PLGLB1Q02325 96 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PIN1Q13526 163 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR1Q1Q15612 314 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NRF1Q16656 503 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF791Q3KP31 576 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 COLEC12Q5KU26 742 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DCST1Q5T197 706 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OTUD3Q5T2D3 398 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LPCAT4Q643R3 524 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR5M10Q6IEU7 315 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF730Q6ZMV8 503 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HIPK1Q86Z02 1210 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RBM45Q8IUH3 476 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GRAMD2AQ8IUY3 354 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CDK20Q8IZL9 346 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SVOPLQ8N434 492 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR1J4Q8NGS1 313 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR5K1Q8NHB7 308 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GRHL3Q8TE85 626 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GIPC3Q8TF64 312 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TMEM234Q8WY98 164 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HGDQ93099 445 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PRRC1Q96M27 445 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SECISBP2Q96T21 854 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TACO1Q9BSH4 297 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KLHL4Q9C0H6 718 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 POLR2J2Q9GZM3 115 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 POLR2J3Q9H1A7 115 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 AGPAT4Q9NRZ5 378 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NDUFAF4Q9P032 175 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PDP1Q9P0J1 537 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RIMS3Q9UJD0 308 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WASF3Q9UPY6 502 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NINQ8N4C6 2090 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 AHCTF1Q8WYP5 2266 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TRAPPC13A5PLN9 417 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KLRC4-KLRK1H3BQV0 150 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 J3KTA2 159 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF354AO60765 605 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC25A12O75746 678 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SNX4O95219 450 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR5F1O95221 314 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WDPCPO95876 746 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WT1P19544 449 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FPR1P21462 350 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CXCR1P25024 350 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CD96P40200 585 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 VHLP40337 213 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CASP3P42574 277 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PPP1R8Q12972 351 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MFAP5Q13361 173 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SNTA1Q13424 505 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR1C1Q15619 314 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 COL28A1Q2UY09 1125 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TTC33Q6PID6 262 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 POMZP3Q6PJE2 187 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LACC1Q8IV20 430 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GALNT4Q8N4A0 578 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZADH2Q8N4Q0 377 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 C10orf53Q8N6V4 93 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ATG16L2Q8NAA4 619 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FAM98AQ8NCA5 519 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR5W2Q8NH69 310 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC35B4Q969S0 331 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC41A3Q96GZ6 507 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 C7orf34Q96L11 122 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ALPK1Q96QP1 1244 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CIB1Q99828 191 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DSN1Q9H410 356 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GALNT9Q9HCQ5 603 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KLHL1Q9NR64 748 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MED11Q9P086 117 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 B4GALT7Q9UBV7 327 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DKKL1Q9UK85 242 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC7A7Q9UM01 511 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 BOKQ9UMX3 212 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WIF1Q9Y5W5 379 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 IGF2RP11717 2491 aa9.75□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR5H15A6NDH6 313 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MKRN2OSH3BPM6 223 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CDK2AP1O14519 115 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR10H3O60404 316 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FMO6PO60774 539 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TRAPPC6AO75865 159 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SEMG1P04279 462 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CCL3P10147 92 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PRG2P13727 222 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CDH2P19022 906 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CCNA2P20248 432 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CNR1P21554 472 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TCEA1P23193 301 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GCKP35557 465 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms