RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CLEC2LP0C7M8 214 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 CD38P28907 300 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 GPR3P46089 330 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 SKP1P63208 163 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 BTG2P78543 158 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 FABP5Q01469 135 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 STX4Q12846 297 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 TDGQ13569 410 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ERV3-1Q14264 604 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ZNHIT3Q15649 155 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 RPL13AP3Q6NVV1 102 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 DEFB119Q8N690 84 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 OR52N1Q8NH53 320 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 RNF217Q8TC41 542 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 CEP19Q96LK0 163 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 SECISBP2Q96T21 854 aaKnown RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PRTFDC1Q9NRG1 225 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF229Q9UJW7 825 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 MRPS33Q9Y291 106 aaKnown RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 V9GYH0 126 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 OR2W5A6NFC9 320 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PTP4A3O75365 173 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 RCBTB2O95199 551 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PTTG1O95997 202 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 BMP7P18075 431 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 MXD1Q05195 221 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 CD300CQ08708 224 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF141Q15928 474 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 BMP8AQ7Z5Y6 402 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 GKN2Q86XP6 184 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 LAX1Q8IWV1 398 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ARIH2OSQ8N7S6 290 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF614Q8N883 585 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 LSMEM1Q8N8F7 131 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ZFP41Q8N8Y5 198 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 GALNT6Q8NCL4 622 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 RCBTB1Q8NDN9 531 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 OR6C4Q8NGE1 309 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 LMX1AQ8TE12 382 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 ADAMTS18Q8TE60 1221 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 GRHL3Q8TE85 626 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 KISS1RQ969F8 398 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 SPACA7Q96KW9 195 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PTCHD1Q96NR3 888 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 HCAR1Q9BXC0 346 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 CMC2Q9NRP2 79 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 TNFRSF10DQ9UBN6 386 aa12.94□□□□□ -0.34
LIMK1-208ENST00000538333 PLEKHB1Q9UF11 243 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-208ENST00000538333 MN1Q10571 1320 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 RGS5O15539 181 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 NGFRP08138 427 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CT45A8P0DMV1 189 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CT45A9P0DMV2 189 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SDC2P34741 201 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SLC9A3P48764 834 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 HNRNPA0Q13151 305 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 FGFBP1Q14512 234 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF791Q3KP31 576 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CRTC2Q53ET0 693 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CT45A2Q5DJT8 189 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF362Q5T0B9 420 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 PRPF38BQ5VTL8 546 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 VASNQ6EMK4 673 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SMARCD3Q6STE5 483 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SLC38A3Q99624 504 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 TIMP4Q99727 224 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 RERGLQ9H628 205 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 MED20Q9H944 212 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 HEATR5AQ86XA9 2040 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 AKAP8O43823 692 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 PRAMEF2O60811 474 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SAGP10523 405 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 MAOBP27338 520 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 RBM34P42696 430 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 FNTBP49356 437 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 GFERP55789 205 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 COPZ1P61923 177 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 FOXK2Q01167 660 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 RUNX1T1Q06455 604 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 FUT7Q11130 342 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 FHL1Q13642 323 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF267Q14586 743 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF79Q15937 498 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SLC35F1Q5T1Q4 408 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms