RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CPOXP36551 454 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 ACAA2P42765 397 aaKnown RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 CA7P43166 264 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 SUCLG1P53597 346 aaKnown RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 CRISP3P54108 245 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 DSCR4P56555 118 aaPredicted RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 HPCAP84074 193 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 ADORA2A-AS1P86434 159 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 HOXC5Q00444 222 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 TOMM20Q15388 145 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 NHSL2Q5HYW2 709 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 GKAP1Q5VSY0 366 aaPredicted RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 HACD2Q6Y1H2 254 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 LACC1Q8IV20 430 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 OR52P1PQ8NH57 321 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 OR14L1PQ8NHC6 308 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 WDYHV1Q96HA8 205 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 LRRC37BQ96QE4 947 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 DMRTA2Q96SC8 542 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 TIMP4Q99727 224 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 RAD21L1Q9H4I0 556 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 ABCD2Q9UBJ2 740 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 SUCOQ9UBS9 1254 aaKnown RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 B4GALT7Q9UBV7 327 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 HCFC1P51610 2035 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 FAM220BPB1ANY3 271 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 ETV2O00321 342 aaPredicted RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 TPST2O60704 377 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 SOX30O94993 753 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 OPN1LWP04000 364 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 TPOP07202 933 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 PABPC4LP0CB38 370 aaKnown RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 GKN3PP0CG01 181 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 PRKCAP17252 672 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 KLK2P20151 261 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 CD247P20963 164 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 GSK3BP49841 420 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 P2RX1P51575 399 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 ZNF136P52737 540 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 CLDN20P56880 219 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 KCNJ10P78508 379 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 SLC25A3Q00325 362 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 QPRTQ15274 297 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 CYP51A1Q16850 503 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 ZNF630Q2M218 657 aaPredicted RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 CTU2Q2VPK5 515 aaKnown RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 ARHGAP11AQ6P4F7 1023 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 SERPINA11Q86U17 422 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 GGNQ86UU5 652 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 ATCAYQ86WG3 371 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 TMCO5AQ8N6Q1 288 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 BBS10Q8TAM1 723 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 RNF145Q96MT1 663 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 PRR14Q9BWN1 585 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 PRDM14Q9GZV8 571 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 LAT2Q9GZY6 243 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 HOXD1Q9GZZ0 328 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 TMEM185BQ9H7F4 350 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 TAGLN3Q9UI15 199 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 MRPS18CQ9Y3D5 142 aaKnown RBP11.82□□□□□ -0.52
CHFR-216ENST00000538235 ZNF337Q9Y3M9 751 aa11.82□□□□□ -0.52
CHFR-216ENST00000538235 TRGV8A0A0C4DH27 118 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 EVPLLA8MZ36 301 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 HNRNPCL2B2RXH8 293 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 NDUFAB1O14561 156 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 EIF4E2O60573 245 aaKnown RBP11.81□□□□□ -0.52
CHFR-216ENST00000538235 HNRNPCL1O60812 293 aaKnown RBP11.81□□□□□ -0.52
CHFR-216ENST00000538235 CYP7B1O75881 506 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 DCTN3O75935 186 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 TOXO94900 526 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 MFN2O95140 757 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 DBIP07108 87 aaKnown RBP11.81□□□□□ -0.52
CHFR-216ENST00000538235 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 HPGDP15428 266 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 ABOP16442 354 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 ZNF708P17019 499 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 TNFRSF1BP20333 461 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 FUT4P22083 530 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 HTR2AP28223 471 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 ANXA11P50995 505 aaKnown RBP11.81□□□□□ -0.52
CHFR-216ENST00000538235 CCR4P51679 360 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 PSME3P61289 254 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 NPTX1Q15818 432 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 VMACQ2NL98 169 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 GXYLT1Q4G148 440 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 PRAMEF8Q5VWM4 474 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 PRAMEF7Q5VXH5 474 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 RAET1LQ5VY80 246 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 REEP3Q6NUK4 255 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 RINLQ6ZS11 566 aa11.81□□□□□ -0.52
CHFR-216ENST00000538235 FJX1Q86VR8 437 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms