RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 QSOX2Q6ZRP7 698 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CXXC5Q7LFL8 322 aaKnown RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 UBALD2Q8IYN6 164 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 SLC46A1Q96NT5 459 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CNPPD1Q9BV87 410 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 NUAK2Q9H093 628 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CUTCQ9NTM9 273 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 FBXO34Q9NWN3 711 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 DNAJB12Q9NXW2 375 aaKnown RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 CLEC2DQ9UHP7 191 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 NTNG1Q9Y2I2 539 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GSTK1Q9Y2Q3 226 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CENPVL1A0A0U1RR11 272 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SLC22A31A6NKX4 558 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SLC30A4O14863 429 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 TOX3O15405 576 aaPredicted RBP12.54□□□□□ -0.4
SMG6-203ENST00000536871 OR2B3O76000 313 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SNX4O95219 450 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 IFNGP01579 166 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 IL1AP01583 271 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 HBQ1P09105 142 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 PRG2P13727 222 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 MAOBP27338 520 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 ATP6V1E1P36543 226 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SLC9A3P48764 834 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 RORCP51449 518 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 GPR50Q13585 617 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
SMG6-203ENST00000536871 TRIM16LQ309B1 348 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 PLK5Q496M5 336 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 ZNF362Q5T0B9 420 aaPredicted RBP12.54□□□□□ -0.4
SMG6-203ENST00000536871 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 DGAT2L6Q6ZPD8 337 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 PRSS42Q7Z5A4 293 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 GPR135Q8IZ08 494 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SIX5Q8N196 739 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 KLHL36Q8N4N3 616 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 DEFB119Q8N690 84 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 RCBTB1Q8NDN9 531 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SLC2A12Q8TD20 617 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 CTRCQ99895 268 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 MED18Q9BUE0 208 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
SMG6-203ENST00000536871 EXOSC4Q9NPD3 245 aaKnown RBP12.54□□□□□ -0.4
SMG6-203ENST00000536871 CMC2Q9NRP2 79 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
SMG6-203ENST00000536871 IGHV1OR21-1A0A087WYE8 117 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 A0A1B0GWA3 101 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 RIIAD1A6NNX1 92 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 LOC110117498-PIK3R3F6TDL0 507 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 BHLHE40O14503 412 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 DSCR3O14972 297 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 PIP5K1CO60331 668 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 GPX5O75715 221 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ADRA2AP08913 450 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SAGP10523 405 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 SSTR4P31391 388 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SLC6A6P31641 620 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 GABRA5P31644 462 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ETV5P41161 510 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 SLC1A3P43003 542 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CRYBB2P43320 205 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 EIF2B2P49770 351 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 ETV1P50549 477 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 GFERP55789 205 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 POU4F2Q12837 409 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 BCDIN3DQ7Z5W3 292 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 D2HGDHQ8N465 521 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ZNF614Q8N883 585 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 OR4C6Q8NH72 309 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CNOT9Q92600 299 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ASPNQ9BXN1 380 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 MKKSQ9NPJ1 570 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 TNFRSF10DQ9UBN6 386 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 ERVK-19Q9WJR5 959 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SIGLEC7Q9Y286 467 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 MN1Q10571 1320 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 SERINC4A6NH21 518 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 TGFBR3LH3BV60 316 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CDC42EP2O14613 210 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CT45A8P0DMV1 189 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CT45A9P0DMV2 189 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 RORAP35398 523 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 PPICP45877 212 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms