RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 IRF2BPLQ9H1B7 796 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 C3orf14Q9HBI5 128 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF304Q9HCX3 659 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LANCL2Q9NS86 450 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZCCHC3Q9NUD5 404 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 QPCTLQ9NXS2 382 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SRPK3Q9UPE1 567 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC9A8Q9Y2E8 581 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LOXL2Q9Y4K0 774 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 AKAP13Q12802 2813 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HNRNPCL2B2RXH8 293 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 POLR1CO15160 346 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GPX5O75715 221 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 EPPINO95925 133 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FHP07954 510 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NKX2-5P52952 324 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CDK5Q00535 292 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF91Q05481 1191 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TARDBPQ13148 414 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DOC2BQ14184 412 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPHARQ15513 63 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ENTPD8Q5MY95 495 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM69BQ5VUD6 431 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CDCP2Q5VXM1 449 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DESI1Q6ICB0 168 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 WDR53Q7Z5U6 358 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 COMTD1Q86VU5 262 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MORN4Q8NDC4 146 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CAPSLQ8WWF8 208 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TSLPQ969D9 159 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PRRC1Q96M27 445 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MND1Q9BWT6 205 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PINK1Q9BXM7 581 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MAN2C1Q9NTJ4 1040 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MRPS18AQ9NVS2 196 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SEC14L4Q9UDX3 406 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SYT5O00445 386 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SOX14O95416 240 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GPR75O95800 540 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CHRM4P08173 479 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 IGFBP1P08833 259 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CT62P0C5K7 136 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FGF5P12034 268 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MAN2A2P49641 1150 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NHLH1Q02575 133 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FUT5Q11128 374 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PIN1Q13526 163 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MINDY4Q4G0A6 757 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 C6orf183Q5T699 404 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF385CQ66K41 422 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZER1Q7Z7L7 766 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR56A1Q8NGH5 318 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR5D16Q8NGK9 328 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PIK3R3Q92569 461 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TSSK6Q9BXA6 273 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PRTFDC1Q9NRG1 225 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CRNNQ9UBG3 495 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TESQ9UGI8 421 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRAPPC4Q9Y296 219 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
CDK5RAP3-202ENST00000536708 H3BN98 237 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 M0R3H8 397 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HRKO00198 91 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FTH1P19P0C7X4 201 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GSTM3P21266 225 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MMP11P24347 488 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MPIP34949 423 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CRYBB2P43320 205 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GIPRP48546 466 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PRKAG1P54619 331 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MLLT11Q13015 90 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRMT12Q53H54 448 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MRGPREQ86SM8 312 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LAPTM4BQ86VI4 370 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CLIP4Q8N3C7 705 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR4K5Q8NGD3 323 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CMKLR1Q99788 373 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 YIPF4Q9BSR8 244 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CCDC32Q9BV29 185 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TP63Q9H3D4 680 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NEK6Q9HC98 313 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PISDQ9UG56 409 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DIMT1Q9UNQ2 313 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MRPS33Q9Y291 106 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PCDHGB6Q9Y5F9 930 aa11.97□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MT-CO3P00414 261 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms