RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 TEKT2Q9UIF3 430 aa16.33■□□□□ 0.2
CACNB3-202ENST00000536187 CLOCKO15516 846 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 RRP8O43159 456 aaKnown RBP16.32■□□□□ 0.2
CACNB3-202ENST00000536187 CEACAM4O75871 244 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 PDGFAP04085 211 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 EPS8Q12929 822 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 OR1C1Q15619 314 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 LRRC36Q1X8D7 754 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 WDSUB1Q8N9V3 476 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 PSD4Q8NDX1 1056 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 ADAMTS16Q8TE57 1224 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 ZCCHC14Q8WYQ9 949 aaKnown RBP16.32■□□□□ 0.2
CACNB3-202ENST00000536187 OSBPL11Q9BXB4 747 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 KLHL28Q9NXS3 571 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 FBXL2Q9UKC9 423 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 ACAD8Q9UKU7 415 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 SLC35A3Q9Y2D2 325 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 WIF1Q9Y5W5 379 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 MED12Q93074 2177 aa16.32■□□□□ 0.2
CACNB3-202ENST00000536187 SAC3D1A6NKF1 404 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 GTPBP1O00178 669 aaKnown RBP16.31■□□□□ 0.2
CACNB3-202ENST00000536187 TP53I11O14683 189 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 LYPD3O95274 346 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 FASP25445 335 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 PEX2P28328 305 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 CDH12P55289 794 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 MFAP5Q13361 173 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 SLC22A10Q63ZE4 541 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 OR2T5Q6IEZ7 315 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 TBPL2Q6SJ96 375 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 WDR88Q6ZMY6 472 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 RTL4Q6ZR62 310 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 CMIPQ8IY22 773 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 ICA1LQ8NDH6 482 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 OR2T29Q8NH02 315 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 PIP5K1AQ99755 562 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 UTP23Q9BRU9 249 aaKnown RBP16.31■□□□□ 0.2
CACNB3-202ENST00000536187 TRIM45Q9H8W5 580 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-202ENST00000536187 TRBV4-1A0A0J9YWV2 114 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 PDLIM1O00151 329 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 LDLRP01130 860 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 FOXK1P85037 733 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 SPIBQ01892 262 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 OR1Q1Q15612 314 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 ARSKQ6UWY0 536 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 ANGPTL4Q9BY76 406 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 NMNAT1Q9HAN9 279 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-202ENST00000536187 KLHL1Q9NR64 748 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 ACER3Q9NUN7 267 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 LYVE1Q9Y5Y7 322 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 PIEZO2Q9H5I5 2752 aa16.31■□□□□ 0.2
CACNB3-202ENST00000536187 ITPR1Q14643 2758 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 GNB5O14775 395 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 CDC40O60508 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
CACNB3-202ENST00000536187 RHCEP18577 417 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 TCEA1P23193 301 aaKnown RBP16.3■□□□□ 0.2
CACNB3-202ENST00000536187 SLC34A1Q06495 639 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 SEC23BQ15437 767 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 MDS2Q8NDY4 140 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 EXTL1Q92935 676 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 SGCZQ96LD1 299 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 PRRC1Q96M27 445 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 FRMD6Q96NE9 622 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 LAT2Q9GZY6 243 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 DNAJB9Q9UBS3 223 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 OAZ3Q9UMX2 235 aa16.3■□□□□ 0.2
CACNB3-202ENST00000536187 A0A087WV48 116 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 SHISA8B8ZZ34 492 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 SLC25A12O75746 678 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 PRKACGP22612 351 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 RFC3P40938 356 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 PLEKHM3Q6ZWE6 761 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 GDF7Q7Z4P5 450 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 NKAIN4Q8IVV8 208 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 CADM2Q8N3J6 435 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 OR4C15Q8NGM1 316 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 OIT3Q8WWZ8 545 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 GNRHR2Q96P88 292 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 CIB1Q99828 191 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 DSN1Q9H410 356 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 EXOSC3Q9NQT5 275 aaKnown RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 PPP4R1LQ9P1A2 415 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 TESQ9UGI8 421 aaKnown RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 PRRC2CQ9Y520 2896 aaKnown RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 A0A1B0GWA3 101 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 OR5H15A6NDH6 313 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 H3BNH8 94 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 LIMS1P48059 325 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 TAS2R41P59536 307 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 CXADRP78310 365 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 TRIP10Q15642 601 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 EXOC3L2Q2M3D2 409 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 TMEM81Q6P7N7 255 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 RANBP3LQ86VV4 465 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 MEX3DQ86XN8 651 aaKnown RBP16.29■□□□□ 0.2
CACNB3-202ENST00000536187 B4GALNT2Q8NHY0 566 aa16.29■□□□□ 0.2
CACNB3-202ENST00000536187 RELTQ969Z4 430 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 500.5 ms