RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
RTN3-207ENST00000536011 GIMAP2Q9UG22 337 aa11.74□□□□□ -0.53
RTN3-207ENST00000536011 GPR52Q9Y2T5 361 aa11.74□□□□□ -0.53
RTN3-207ENST00000536011 A0A0J9YW62 118 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 TMCC2O75069 709 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 UBL4AP11441 157 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
RTN3-207ENST00000536011 SLC7A1P30825 629 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 SELENBP1Q13228 472 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 CBFBQ13951 182 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ANKRD34AQ69YU3 496 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 RIMKLAQ8IXN7 391 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 SLC43A2Q8N370 569 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 TMCO5AQ8N6Q1 288 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ZNF614Q8N883 585 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 POC1BQ8TC44 478 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 RNF128Q8TEB7 428 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 MARK4Q96L34 752 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 MRGPRX4Q96LA9 322 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 C3orf30Q96M34 536 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
RTN3-207ENST00000536011 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ZNF395Q9H8N7 513 aaPredicted RBP11.73□□□□□ -0.53
RTN3-207ENST00000536011 GPATCH2Q9NW75 528 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ASIC5Q9NY37 505 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ZDHHC2Q9UIJ5 367 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 ICAM5Q9UMF0 924 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 PCDHGB4Q9UN71 923 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 CARD8Q9Y2G2 431 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 DTNAQ9Y4J8 743 aa11.73□□□□□ -0.53
RTN3-207ENST00000536011 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
RTN3-207ENST00000536011 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
RTN3-207ENST00000536011 ZNF264O43296 627 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 EIF4E2O60573 245 aaKnown RBP11.72□□□□□ -0.53
RTN3-207ENST00000536011 AGR2O95994 175 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 OPN1LWP04000 364 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 G6PDP11413 515 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 CLDN8P56748 225 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 EMX2Q04743 252 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 PLEKHM3Q6ZWE6 761 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 VPS37AQ8NEZ2 397 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 OR5W2Q8NH69 310 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 FBXO27Q8NI29 283 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 ZFP90Q8TF47 636 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
RTN3-207ENST00000536011 OIT3Q8WWZ8 545 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 OR7D2Q96RA2 312 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 BDH2Q9BUT1 245 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 TMEM109Q9BVC6 243 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 NMUR2Q9GZQ4 415 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 C12orf49Q9H741 205 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 NGBQ9NPG2 151 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 EXD2Q9NVH0 621 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 KLHL13Q9P2N7 655 aa11.72□□□□□ -0.53
RTN3-207ENST00000536011 RNF103-CHMP3A0A140T963 221 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 NPIPB9F8W1W9 429 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
RTN3-207ENST00000536011 ZNF195O14628 629 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 BIRC5O15392 142 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 TYROBPO43914 113 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 STX11O75558 287 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 PRKD3O94806 890 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 SERPINE1P05121 402 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 MYZAPP0CAP1 466 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 PRKCAP17252 672 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 HOXB4P17483 251 aaPredicted RBP11.71□□□□□ -0.53
RTN3-207ENST00000536011 CCR4P51679 360 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 HBA1P69905 142 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 KRT71Q3SY84 523 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 ATAD3BQ5T9A4 648 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 C3orf33Q6P1S2 294 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 CBLN3Q6UW01 205 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 ZNF704Q6ZNC4 412 aaPredicted RBP11.71□□□□□ -0.53
RTN3-207ENST00000536011 FCRLAQ7L513 359 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 C16orf62Q7Z3J2 963 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 WFDC8Q8IUA0 241 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 ARSGQ96EG1 525 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 PERPQ96FX8 193 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 SLC35G5Q96KT7 338 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 NPAS1Q99742 590 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
RTN3-207ENST00000536011 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 SERINC1Q9NRX5 453 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 KLHL9Q9P2J3 617 aa11.71□□□□□ -0.53
RTN3-207ENST00000536011 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ARID1AO14497 2285 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms