RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NMUR1Q9HB89 426 aa2.81□□□□□ -1.96
SNHG1-202ENST00000535689 PLCXD1Q9NUJ7 323 aa2.81□□□□□ -1.96
SNHG1-202ENST00000535689 CHCHD3Q9NX63 227 aaKnown RBP2.81□□□□□ -1.96
SNHG1-202ENST00000535689 ERRFI1Q9UJM3 462 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-202ENST00000535689 NOCTQ9UK39 431 aaKnown RBP2.81□□□□□ -1.96
SNHG1-202ENST00000535689 CLEC4EQ9ULY5 219 aa2.81□□□□□ -1.96
SNHG1-202ENST00000535689 NSG2Q9Y328 171 aa2.81□□□□□ -1.96
SNHG1-202ENST00000535689 SEC16AO15027 2179 aa2.81□□□□□ -1.96
SNHG1-202ENST00000535689 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
SNHG1-202ENST00000535689 SPENQ96T58 3664 aaKnown RBP2.81□□□□□ -1.96
SNHG1-202ENST00000535689 POLEQ07864 2286 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 MAGEB16A2A368 324 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 PP2D1A8MPX8 630 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 C21orf140B9A014 251 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 XPO1O14980 1071 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CTDSPLO15194 276 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 TOX3O15405 576 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 HCRTO43612 131 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 KIF5CO60282 957 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 STX10O60499 249 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CLDN11O75508 207 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 STK17BO94768 372 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CTDNEP1O95476 244 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 POP4O95707 220 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SLC16A8O95907 504 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ALPPP05187 535 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ADRB3P13945 408 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC130P13994 396 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ANPEPP15144 967 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 PTMSP20962 102 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 PSMB4P28070 264 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CASP14P31944 242 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 DLSTP36957 453 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 MMP12P39900 470 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ETV5P41161 510 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CASP3P42574 277 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ACADSBP45954 432 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 UQCRFS1P47985 274 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 RPL34P49207 117 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CCL11P51671 97 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 GSCP56915 257 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SRP54P61011 504 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ENPEPQ07075 957 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CYP24A1Q07973 514 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 BST2Q10589 180 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 LCP2Q13094 533 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SRSF6Q13247 344 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF235Q14590 738 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 DUSP5Q16690 384 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 RFTN2Q52LD8 501 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SLC25A53Q5H9E4 307 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 PIP5KL1Q5T9C9 394 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 OR6B2Q6IFH4 312 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 RFWD3Q6PCD5 774 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 WDR74Q6RFH5 385 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 DHRS11Q6UWP2 260 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 LRRC31Q6UY01 552 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 C3P1Q6ZMU1 363 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 GCNT7Q6ZNI0 430 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CYP4V2Q6ZWL3 525 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SLC22A15Q8IZD6 547 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SLC22A18ASQ8N1D0 253 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ZADH2Q8N4Q0 377 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 C12orf29Q8N999 325 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ST6GALNAC3Q8NDV1 305 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 OR13C5Q8NGS8 318 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SPPL2AQ8TCT8 520 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CXorf40AQ8TE69 158 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ART4Q93070 314 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ISG20Q96AZ6 181 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 AP2M1Q96CW1 435 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 C14orf79Q96F83 325 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 ANKRD27Q96NW4 1050 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 AGAP4Q96P64 663 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 GAL3ST4Q96RP7 486 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SECISBP2Q96T21 854 aaKnown RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 NAP1L3Q99457 506 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-202ENST00000535689 FEM1AQ9BSK4 669 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CCM2Q9BSQ5 444 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 APOOQ9BUR5 198 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 GSDMCQ9BYG8 508 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SLC5A7Q9GZV3 580 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 SHARPINQ9H0F6 387 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 DNAJB9Q9UBS3 223 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 KLK11Q9UBX7 282 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 FBXW2Q9UKT8 454 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 HPCAL4Q9UM19 191 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 KCNK6Q9Y257 313 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 HS3ST2Q9Y278 367 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 PPP2R2CQ9Y2T4 447 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CNTRLQ7Z7A1 2325 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC88CQ9P219 2028 aa2.8□□□□□ -1.96
SNHG1-202ENST00000535689 MTORP42345 2549 aa2.79□□□□□ -1.96
SNHG1-202ENST00000535689 A0A087WZ39 114 aa2.79□□□□□ -1.96
SNHG1-202ENST00000535689 TRBV4-1A0A0J9YWV2 114 aa2.79□□□□□ -1.96
SNHG1-202ENST00000535689 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
SNHG1-202ENST00000535689 ZSCAN5CA6NGD5 496 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms