RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CLDN20P56880 219 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 E2F1Q01094 437 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 MLC1Q15049 377 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 TCTE3Q8IZS6 198 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 RAB42Q8N4Z0 105 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 WFIKKN2Q8TEU8 576 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 DNAJA4Q8WW22 397 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-226ENST00000533820 ST8SIA4Q92187 359 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 RADILQ96JH8 1075 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 ENAMQ9NRM1 1142 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 C20orf141Q9NUB4 165 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 FBXL4Q9UKA2 621 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 DAPL1A0PJW8 107 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF860A6NHJ4 632 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 CHST10O43529 356 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 RNF13O43567 381 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 FAM157BP0CG42 384 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 F3P13726 295 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 SIM1P81133 766 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-226ENST00000533820 LAMTOR1Q6IAA8 161 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 SLC48A1Q6P1K1 146 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 OR7G2Q8NG99 324 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 GANCQ8TET4 914 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 IFT46Q9NQC8 304 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 IL20Q9NYY1 176 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF222Q9UK12 451 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 ALPK2Q86TB3 2170 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 MAP2K6P52564 334 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 SF3A2Q15428 464 aaKnown RBP17.98■□□□□ 0.47
CAPN1-226ENST00000533820 FCN2Q15485 313 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 TMEM52BQ4KMG9 183 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 CREB3L2Q70SY1 520 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 DUSP18Q8NEJ0 188 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 TRIM43Q96BQ3 446 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ZFP3Q96NJ6 502 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ARHGDIGQ99819 225 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 THAP7Q9BT49 309 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-226ENST00000533820 MS4A7Q9GZW8 240 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-226ENST00000533820 NUDT15Q9NV35 164 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 WDR45Q9Y484 360 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 CACNB4O00305 520 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-226ENST00000533820 FABP7O15540 132 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 SLC22A5O76082 557 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ZGLP1P0C6A0 271 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 HTR1FP30939 366 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ESPNLQ6ZVH7 1005 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ETFBKMTQ8IXQ9 262 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 GPR135Q8IZ08 494 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 ACBD7Q8N6N7 88 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 OR4E2Q8NGC2 313 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 OR51A7Q8NH64 312 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 MARVELD3Q96A59 401 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 OR52D1Q9H346 318 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 C11orf49Q9H6J7 331 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 PRSS16Q9NQE7 514 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 KLHL21Q9UJP4 597 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 CDH10Q9Y6N8 788 aa17.98■□□□□ 0.47
CAPN1-226ENST00000533820 J3QLW9 94 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 EFCAB14O75071 495 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF19P17023 458 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 FPR3P25089 353 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 HSD17B2P37059 387 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 MAB21L1Q13394 359 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ADAMTSL4Q6UY14 1074 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 BMPERQ8N8U9 685 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 OR2L5Q8NG80 312 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 C12orf57Q99622 126 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 MARVELD1Q9BSK0 173 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 PPA2Q9H2U2 334 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 FBXO34Q9NWN3 711 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-226ENST00000533820 CACNA1CQ13936 2221 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 A0A0A6YYJ9 748 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 TRAV20A0A0B4J274 112 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 A0A1W2PP55 124 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 PROM1O43490 865 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 C1QBP02746 253 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 CD3GP09693 182 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-226ENST00000533820 HCCSP53701 268 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 HTRA3P83110 453 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 MRGPREQ86SM8 312 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF614Q8N883 585 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 BEST4Q8NFU0 473 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 OR52H1Q8NGJ2 320 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ADAP2Q9NPF8 381 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 LOC105369274A0A096LPK9 316 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 C1QTNF3-AMACRE9PGA6 284 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 NOS3P29474 1203 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 STAT5AP42229 794 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 IRF4Q15306 451 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 AANATQ16613 207 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 SLC25A35Q3KQZ1 300 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 TMEM64Q6YI46 380 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 WDR88Q6ZMY6 472 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 MTSS1LQ765P7 747 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 RD3Q7Z3Z2 195 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 CEACAM19Q7Z692 300 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 OR4N4Q8N0Y3 316 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 C17orf47Q8NEP4 570 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms