RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 COX20Q5RI15 118 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 LRIF1Q5T3J3 769 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 OR2A2Q6IF42 318 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 SLC2A7Q6PXP3 512 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 CBLN3Q6UW01 205 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 P4HA3Q7Z4N8 544 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 NAXEQ8NCW5 288 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 SMPDL3BQ92485 455 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 MRGPRX4Q96LA9 322 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 SFXN3Q9BWM7 321 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
TSKU-204ENST00000533752 CACYBPQ9HB71 228 aaKnown RBP14.28□□□□□ -0.12
TSKU-204ENST00000533752 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.28□□□□□ -0.12
TSKU-204ENST00000533752 SLC6A13Q9NSD5 602 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 FGFR1OP2Q9NVK5 253 aa14.28□□□□□ -0.12
TSKU-204ENST00000533752 A0A1W2PP18 115 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 GJE1A6NN92 205 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 KDM4EB2RXH2 506 aaPredicted RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 SHISA8B8ZZ34 492 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CLIC1O00299 241 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 RCBTB2O95199 551 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CHRM4P08173 479 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 VIMP08670 466 aaKnown RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 TMIGD3P0DMS9 266 aaPredicted RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 CAPN3P20807 821 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 BMP5P22003 454 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 PSMA4P25789 261 aaKnown RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 PEX19P40855 299 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 ASCL1P50553 236 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 RNF144AP50876 292 aaPredicted RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 ZNF136P52737 540 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 MVDP53602 400 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CRISP3P54108 245 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CLDN20P56880 219 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CHRNEQ04844 493 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 FOXF1Q12946 379 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 SYPL1Q16563 259 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 GTDC1Q4AE62 458 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 PDSS1Q5T2R2 415 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 PEX5LQ8IYB4 626 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 ANKFN1Q8N957 763 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 C9orf106Q8NAJ2 232 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 FAM71CQ8NEG0 241 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 GPR119Q8TDV5 335 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 TSPEARQ8WU66 669 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 TMEM234Q8WY98 164 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 ST8SIA1Q92185 356 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 AURKBQ96GD4 344 aaPredicted RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 TMEM120AQ9BXJ8 343 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 UCK2Q9BZX2 261 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 SLC38A1Q9H2H9 487 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 ZNF385DQ9H6B1 395 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 MTHFD2LQ9H903 347 aaPredicted RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
TSKU-204ENST00000533752 KCNE5Q9UJ90 142 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 CORO2BQ9UQ03 480 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 PCDHB14Q9Y5E9 798 aa14.27□□□□□ -0.13
TSKU-204ENST00000533752 NBPF19A0A087WUL8 3843 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PKDREJQ9NTG1 2253 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 CENPVL1A0A0U1RR11 272 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PRAMEF27A3QJZ7 478 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 AGAP5A6NIR3 686 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 C19orf84I3L1E1 186 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 ETV2O00321 342 aaPredicted RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 EIF1AYO14602 144 aaKnown RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 ANGPT2O15123 496 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 OIP5O43482 229 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 DNAJA2O60884 412 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 CYP7B1O75881 506 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 C1QCP02747 245 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 CRHP06850 196 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 DBIP07108 87 aaKnown RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 UBTFL6P0CB48 400 aaPredicted RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 ETFAP13804 333 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PRKCAP17252 672 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 HOXB9P17482 250 aaPredicted RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 PGCP20142 388 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 SLC6A8P48029 635 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 SUCLG1P53597 346 aaKnown RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 SELENBP1Q13228 472 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 MAPK14Q16539 360 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 SGCBQ16585 318 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 NDUFAF6Q330K2 333 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 SLC25A53Q5H9E4 307 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PRAMEF8Q5VWM4 474 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PRAMEF7Q5VXH5 474 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 ESPNLQ6ZVH7 1005 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 OLIG3Q7RTU3 272 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 GGNQ86UU5 652 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 ACBD4Q8NC06 268 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 WDR60Q8WVS4 1066 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 PINK1Q9BXM7 581 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 ENKD1Q9H0I2 346 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 LEF1Q9UJU2 399 aaPredicted RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 FOXD3Q9UJU5 478 aaPredicted RBP14.26□□□□□ -0.13
TSKU-204ENST00000533752 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
TSKU-204ENST00000533752 ADGRG4Q8IZF6 3080 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms