RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	TMEM244	Q5VVB8	128 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	ANKRD54	Q6NXT1	300 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR5D14	Q8NGL3	314 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	DCUN1D4	Q92564	292 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	NAT6	Q93015	286 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	SSX3	Q99909	188 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	EMC3	Q9P0I2	261 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	TRIM64C	A6NLI5	447 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	FOXE1	O00358	373 aa	Predicted RBP	18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	MZT1	Q08AG7	82 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	RAB40B	Q12829	278 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	C3orf38	Q5JPI3	329 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	B3GNT7	Q8NFL0	401 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	ACOT11	Q8WXI4	607 aa	Predicted RBP	18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	DDX31	Q9H8H2	851 aa	Known RBP	18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	TEX10	Q9NXF1	929 aa	Predicted RBP	18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	AP1M2	Q9Y6Q5	423 aa		18.35	■□□□□ 0.53
FGFR1-238	ENST00000532791	TRAV27	A0A087WT01	109 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZNF736	B4DX44	427 aa	Predicted RBP	18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	CPM	P14384	443 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	GABRR1	P24046	479 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	CCNJ	Q5T5M9	372 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	WBP2NL	Q6ICG8	309 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	TMEM100	Q9NV29	134 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	NSG1	A0A0A6YYJ2	146 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	ARNTL	O00327	626 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZFAND5	O76080	213 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	EGF	P01133	1207 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	F3	P13726	295 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	AOAH	P28039	575 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	ALDH3B2	P48448	385 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	RAB5B	P61020	215 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	CNEP1R1	Q8N9A8	125 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC7A13	Q8TCU3	470 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	LRFN1	Q9P244	771 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	PLSCR5	A0PG75	271 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	RGS6	P49758	472 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	GPR149	Q86SP6	731 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	SYNPR	Q8TBG9	265 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR52D1	Q9H346	318 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	TAAR2	Q9P1P5	351 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	NAP1L6	A6NFF2	107 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791		F5H5P2	479 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC16A7	O60669	478 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	P2RY14	Q15391	338 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	ENTPD8	Q5MY95	495 aa		18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	INTS6	Q9UL03	887 aa	Known RBP	18.34	■□□□□ 0.53
FGFR1-238	ENST00000532791	DBH	P09172	617 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	CA5A	P35218	305 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	CXCR4	P61073	352 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	ANKLE1	Q8NAG6	615 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	FBXO27	Q8NI29	283 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	SENP5	Q96HI0	755 aa	Predicted RBP	18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZNF681	Q96N22	645 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	UHRF1	Q96T88	793 aa	Predicted RBP	18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	CSNK1G1	Q9HCP0	422 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZNF334	Q9HCZ1	680 aa	Predicted RBP	18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	HEBP1	Q9NRV9	189 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	PRELID1	Q9Y255	219 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	CACNG2	Q9Y698	323 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	VASP	P50552	380 aa	Predicted RBP	18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	ACSM3	Q53FZ2	586 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	KRBOX4	Q5JUW0	171 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	CTSL3P	Q5NE16	218 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	METTL11B	Q5VVY1	283 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	TLDC1	Q6P9B6	456 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	VRK2	Q86Y07	508 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	ARFGAP1	Q8N6T3	406 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	EVA1A	Q9H8M9	152 aa		18.33	■□□□□ 0.53
FGFR1-238	ENST00000532791	TSPAN15	O95858	294 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	AKAIN1	P0CW23	69 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	PLCXD3	Q63HM9	321 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	ADAMTS16	Q8TE57	1224 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	ITFG2	Q969R8	447 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	PCDHB10	Q9UN67	800 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	AKAP12	Q02952	1782 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	ETV5	P41161	510 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	RPS5	P46782	204 aa	Known RBP	18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR14K1	Q8NGZ2	314 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	ASB11	Q8WXH4	323 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	UBQLN4	Q9NRR5	601 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	DVL2	O14641	736 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR39	O43194	453 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	TAS2R20	P59543	309 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	HTRA3	P83110	453 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	DPY19L2P1	Q6NXN4	242 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	MEX3B	Q6ZN04	569 aa	Known RBP	18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	ABHD11	Q8NFV4	315 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR2T35	Q8NGX2	323 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	CUTC	Q9NTM9	273 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	HAO2	Q9NYQ3	351 aa		18.33	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR75	O95800	540 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	PAH	P00439	452 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	GYPB	P06028	91 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	C1S	P09871	688 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CAV3	P56539	151 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	RPP30	P78346	268 aa	Known RBP	18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	SLC6A19	Q695T7	634 aa		18.32	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms