RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CYP7B1O75881 506 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SLITRK5O94991 958 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 KCNK2O95069 426 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 NKX2-2O95096 273 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 TGFAP01135 160 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 GSTA1P08263 222 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SBK3P0C264 359 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 NPIPA8P0DM63 369 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 APEHP13798 732 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 EFNA1P20827 205 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 IMPDH1P20839 514 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ATP6V1C1P21283 382 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 IGHV1-2P23083 117 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 IGFBP5P24593 272 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SRP14P37108 136 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 OR3A2P47893 321 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SERPINB9P50453 376 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CCR4P51679 360 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CHRNB3Q05901 458 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SPOCK1Q08629 439 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CD226Q15762 336 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ELOA3BQ3SY89 546 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 TIMM23BQ5SRD1 257 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 UBAP2Q5T6F2 1119 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 FAM71E1Q6IPT2 247 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 C12orf54Q6X4T0 127 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 Q6ZT83 130 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SLC43A2Q8N370 569 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CDRT4Q8N9R6 151 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SLC16A11Q8NCK7 471 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ELOA3Q8NG57 546 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 OR6Y1Q8NGX8 325 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 FAM110BQ8TC76 370 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 C10orf105Q8TEF2 133 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ZFP90Q8TF47 636 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 PROX1Q92786 737 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CIDECQ96AQ7 238 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 FBXO17Q96EF6 278 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF300Q96RE9 604 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF382Q96SR6 550 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 IQCGQ9H095 443 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 HEATR1Q9H583 2144 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 CXorf36Q9H7Y0 433 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 EML4Q9HC35 981 aaKnown RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 MID1IP1Q9NPA3 183 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM160Q9NX00 188 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 NINJ2Q9NZG7 142 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 NPAP1Q9NZP6 1156 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM216Q9P0N5 145 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 KLHL9Q9P2J3 617 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 MGAT4BQ9UQ53 548 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 YLPM1P49750 1951 aaKnown RBP8.15□□□□□ -1.1
NEDD8-206ENST00000531430 A0A096LNT2 108 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 C7orf72A4D263 438 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 OR5H1A6NKK0 313 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 H3BNH8 94 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 PDPK1O15530 556 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 OIP5O43482 229 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 THBS1P07996 1170 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 LINGO3P0C6S8 592 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 DHRS4L1P0CG22 281 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 ACP2P11117 423 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 EDNRAP25101 427 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 CD40P25942 277 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 GSTM5P46439 218 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 SERPINB4P48594 390 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 EFNA4P52798 201 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 POU6F2P78424 691 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF117Q03924 483 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 SQLEQ14534 574 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 MLC1Q15049 377 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 TOMM34Q15785 309 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-206ENST00000531430 DUSP5Q16690 384 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 NDUFAF6Q330K2 333 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 ARL13AQ5H913 290 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-206ENST00000531430 C9orf135Q5VTT2 229 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 NOXRED1Q6NXP6 359 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 GALNT18Q6P9A2 607 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 CBLN3Q6UW01 205 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 GALNT5Q7Z7M9 940 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 TDRPQ86YL5 185 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 MISPQ8IVT2 679 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 ARL8AQ96BM9 186 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 EGLN2Q96KS0 407 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM237Q96Q45 408 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 OR5B2Q96R09 309 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 PAFAH2Q99487 392 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 VRK1Q99986 396 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-206ENST00000531430 SHCBP1LQ9BZQ2 653 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 MYNNQ9NPC7 610 aa8.15□□□□□ -1.1
NEDD8-206ENST00000531430 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.11
NEDD8-206ENST00000531430 WIPF1O43516 503 aa8.14□□□□□ -1.11
NEDD8-206ENST00000531430 SKAP2O75563 359 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-206ENST00000531430 PSMG1O95456 288 aa8.14□□□□□ -1.11
NEDD8-206ENST00000531430 ENO1P06733 434 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms