RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LCORQ96JN0 433 aaPredicted RBP13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 TAPBPLQ9BX59 468 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 JAM3Q9BX67 310 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC19A3Q9BZV2 496 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 DCSTAMPQ9H295 470 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 OR52D1Q9H346 318 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 UBQLN3Q9H347 655 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 HHATLQ9HCP6 504 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 EXOSC3Q9NQT5 275 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 PNO1Q9NRX1 252 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 PILRBQ9UKJ0 227 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 MAU2Q9Y6X3 613 aa13.63□□□□□ -0.23
ECHDC1-220ENST00000528402 NUP210LQ5VU65 1888 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 OR6C76A6NM76 312 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 HRKO00198 91 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 PIP5K1CO60331 668 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 PTP4A3O75365 173 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CSTAP01040 98 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CLPSP04118 112 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 PSMA1P25786 263 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 HTR1FP30939 366 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CSF2RBP32927 897 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 HOXD12P35452 270 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 OR1D4P47884 311 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 BMXP51813 675 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 LIMK1P53667 647 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CDH11P55287 796 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 NCS1P62166 190 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 ZXDAP98168 799 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 ALG10BQ5I7T1 473 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 ZC3H14Q6PJT7 736 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 SMARCD3Q6STE5 483 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 RTL4Q6ZR62 310 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 METTL27Q8N6F8 245 aaPredicted RBP13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 OR4Q3Q8NH05 313 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 NDNFQ8TB73 568 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 FANK1Q8TC84 345 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 EDAQ92838 391 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 NAT6Q93015 286 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CCDC74AQ96AQ1 378 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 SAMD8Q96LT4 415 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 OR5M11Q96RB7 305 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 TGIF2Q9GZN2 237 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 FGF21Q9NSA1 209 aa13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 CCDC59Q9P031 241 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 EXOGQ9Y2C4 368 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-220ENST00000528402 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 CDC42EP2O14613 210 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 TO15178 435 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 LAMTOR5O43504 91 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 IGKV3-11P04433 115 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 HBQ1P09105 142 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 TDGF1P13385 188 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 HPGDP15428 266 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC9A3P48764 834 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 LSM3P62310 102 aaKnown RBP13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 TSTQ16762 297 aaKnown RBP13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 CLEC12AQ5QGZ9 265 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 SNAP47Q5SQN1 464 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 ARHGAP40Q5TG30 622 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 RHBDD2Q6NTF9 364 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC30A6Q6NXT4 461 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 BPHLQ86WA6 291 aaPredicted RBP13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 C17orf47Q8NEP4 570 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 OR4D9Q8NGE8 314 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 OR6Q1Q8NGQ2 317 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 CEP76Q8TAP6 659 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 SAP25Q8TEE9 199 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 OPALINQ96PE5 141 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 FLRT3Q9NZU0 649 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 ICAM5Q9UMF0 924 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 SIGLEC7Q9Y286 467 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 DTX4Q9Y2E6 619 aa13.61□□□□□ -0.23
ECHDC1-220ENST00000528402 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SCDO00767 359 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 BHLHE40O14503 412 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 ARHGAP33O14559 1287 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 PNMTP11086 282 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 ZNF12P17014 697 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 MAKP20794 623 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 TBXA2RP21731 343 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC6A6P31641 620 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SOX6P35712 828 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 CAPZA2P47755 286 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 GAS1P54826 345 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 WNT4P56705 351 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 PLAURQ03405 335 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 PEAR1Q5VY43 1037 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 WDR88Q6ZMY6 472 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 NUP54Q7Z3B4 507 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms