RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 MBD3L2Q8NHZ7 208 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ZFP3Q96NJ6 502 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 PINK1Q9BXM7 581 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 TMEM185BQ9H7F4 350 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 MTHFD2LQ9H903 347 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 MRGBPQ9NV56 204 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 PCDHB14Q9Y5E9 798 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 GPC6Q9Y625 555 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 A0A1W2PP18 115 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 GJE1A6NN92 205 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 EVPLLA8MZ36 301 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 KDM4EB2RXH2 506 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CLIC1O00299 241 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 OIP5O43482 229 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 SYNGR4O95473 234 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 C1QCP02747 245 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 BCHEP06276 602 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 FCGR2AP12318 317 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 UQCRBP14927 111 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 IL7RP16871 459 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 PGCP20142 388 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CAPN3P20807 821 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CTSSP25774 331 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CEACAM8P31997 349 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 EIF1AXP47813 144 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CRISP3P54108 245 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CLDN15P56746 228 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CLDN20P56880 219 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 RAC1P63000 192 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 FUT5Q11128 374 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 SF3A3Q12874 501 aaKnown RBP eCLIP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 FOXF1Q12946 379 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 MEX3BQ6ZN04 569 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 SEM1Q6ZVN7 128 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 HMGN2P46Q86SG4 172 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 FUNDC1Q8IVP5 155 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 C9orf106Q8NAJ2 232 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 ATP6V1C2Q8NEY4 427 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 FBXO27Q8NI29 283 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 ZNF563Q8TA94 476 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 GPR119Q8TDV5 335 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 WDR60Q8WVS4 1066 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 TMEM234Q8WY98 164 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 PMM1Q92871 262 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 INTS12Q96CB8 462 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 THUMPD3Q9BV44 507 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 LAT2Q9GZY6 243 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 PAIP1Q9H074 479 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 SAP130Q9H0E3 1048 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 TIGARQ9NQ88 270 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 LEF1Q9UJU2 399 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
CAPN1-215ENST00000528396 ICAM5Q9UMF0 924 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CORO2BQ9UQ03 480 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 NDUFAF1Q9Y375 327 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 L3MBTL1Q9Y468 752 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
CAPN1-215ENST00000528396 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ITPR2Q14571 2701 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 EEF1E1-BLOC1S5C9J1V9 151 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 H0YC42 278 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 TOXO94900 526 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 OPN1LWP04000 364 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 DBIP07108 87 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 CHRM4P08173 479 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 LINGO3P0C6S8 592 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ELK4P28324 431 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ADH6P28332 368 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 UQCRC1P31930 480 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 RYKP34925 604 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 SFTPDP35247 375 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 TPD52P55327 224 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 EEF1A1P68104 462 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 FADDQ13158 208 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 SKP2Q13309 424 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 QPRTQ15274 297 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 MAPK14Q16539 360 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 TMEM44Q2T9K0 475 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 EEF1A1P5Q5VTE0 462 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 CMIPQ8IY22 773 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 CNEP1R1Q8N9A8 125 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 NAXEQ8NCW5 288 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ST8SIA1Q92185 356 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ARSGQ96EG1 525 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 REXO5Q96IC2 774 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 MRGPRX4Q96LA9 322 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 UCN2Q96RP3 112 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 SFXN3Q9BWM7 321 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 QRSL1Q9H0R6 528 aaKnown RBP12.06□□□□□ -0.48
CAPN1-215ENST00000528396 ARMC7Q9H6L4 198 aa12.06□□□□□ -0.48
CAPN1-215ENST00000528396 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms