RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 OR10H1Q9Y4A9 318 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 KLK4Q9Y5K2 254 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 NRXN2Q9P2S2 1712 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CDHR2Q9BYE9 1310 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 ABCC12Q96J65 1359 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 NUP98P52948 1817 aa4.9□□□□□ -1.62
PCF11-202ENST00000528336 C17orf105B2RV13 164 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 SDHDO14521 159 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LSM1O15116 133 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 ECDO95905 644 aaPredicted RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 PROS1P07225 676 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 CRYGBP07316 175 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LYNP07948 512 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 SFTPBP07988 381 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 NUDT17P0C025 328 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 STAG3L2P0CL84 134 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 UMPSP11172 480 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 POU2F1P14859 743 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 ANPEPP15144 967 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 PTNP21246 168 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 FCARP24071 287 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 SPAM1P38567 509 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 NAMPTP43490 491 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 TSFMP43897 325 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 GPR4P46093 362 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 CSNK1EP49674 416 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 ARHGDIBP52566 201 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 CDH4P55283 916 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 YWHAEP62258 255 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 OTUD4Q01804 1114 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 GUCY2DQ02846 1103 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 SLAQ13239 276 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 ELAVL3Q14576 367 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 TEX44Q53QW1 395 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 ZNF311Q5JNZ3 666 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 ATL3Q6DD88 541 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 OR4C11Q6IEV9 310 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 FAM166AQ6J272 317 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 VTCN1Q7Z7D3 282 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LHFPL4Q7Z7J7 247 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LINC00523Q86TU6 105 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LRRTM1Q86UE6 522 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LRRC17Q8N6Y2 441 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 OR4K14Q8NGD5 310 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 OR4C15Q8NGM1 316 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 OR13F1Q8NGS4 319 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 ANGPTL6Q8NI99 470 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 PNPT1Q8TCS8 783 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 CD300LFQ8TDQ1 290 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 GPX8Q8TED1 209 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 C2orf48Q96LS8 159 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 OR52A5Q9H2C5 316 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 VCX3BQ9H321 246 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 UCK1Q9HA47 277 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 LY9Q9HBG7 655 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 RAVER2Q9HCJ3 691 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 PHPT1Q9NRX4 125 aaPredicted RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 ACOXLQ9NUZ1 547 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 COPS7AQ9UBW8 275 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 CTSFQ9UBX1 484 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 SATB2Q9UPW6 733 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 BZW2Q9Y6E2 419 aaKnown RBP4.9□□□□□ -1.63
PCF11-202ENST00000528336 ANKRD36CQ5JPF3 1778 aa4.9□□□□□ -1.63
PCF11-202ENST00000528336 KIF13BQ9NQT8 1826 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 RNF222A6NCQ9 220 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 FOXE1O00358 373 aaPredicted RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 CHMP2AO43633 222 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 CDK14O94921 469 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 TRIM49P0CI25 452 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 TRIM49CP0CI26 452 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 DBTP11182 482 aaKnown RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 ZNF24P17028 368 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 AXLP30530 894 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 OR3A2P47893 321 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 TNFSF10P50591 281 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 GSCP56915 257 aaPredicted RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 GSTO1P78417 241 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 HKDC1Q2TB90 917 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 DCAF4L1Q3SXM0 396 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 NKAIN2Q5VXU1 208 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 RAET1LQ5VY80 246 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 PLCXD3Q63HM9 321 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ZSCAN25Q6NSZ9 544 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 TTC27Q6P3X3 843 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ZNF613Q6PF04 617 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 CHMP1BQ7LBR1 199 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ANKRD33Q7Z3H0 272 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 LUZP2Q86TE4 346 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 CROCCP3Q8IVE0 287 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 VSTM4Q8IW00 320 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 CCDC36Q8IYA8 594 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 RNF10Q8N5U6 811 aaKnown RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 TCEANCQ8N8B7 351 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ASCC1Q8N9N2 400 aaKnown RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 MAPK1IP1LQ8NDC0 245 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 NUP37Q8NFH4 326 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 KCNG3Q8TAE7 436 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 RAET1EQ8TD07 263 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 RAB1CQ92928 201 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 GUCD1Q96NT3 240 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms