RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 SETD2Q9BYW2 2564 aaPredicted RBP13.56□□□□□ -0.24
EXOSC4-203ENST00000527954 NPIPB9F8W1W9 429 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 SOX30O94993 753 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 SERPINE1P05121 402 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 TUBBP07437 444 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 MATN1P21941 496 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 LOXP28300 417 aaPredicted RBP13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 C21orf58P58505 322 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ABCE1P61221 599 aaKnown RBP13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ZNF844Q08AG5 666 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ACKR1Q16570 336 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 TMEM176BQ3YBM2 270 aaPredicted RBP13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 OLIG3Q7RTU3 272 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 MREGQ8N565 214 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ZNF524Q96C55 264 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 POM121Q96HA1 1249 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 SDF2Q99470 211 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 C20orf27Q9GZN8 174 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 SERHL2Q9H4I8 314 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 ACTL7BQ9Y614 415 aa13.55□□□□□ -0.24
EXOSC4-203ENST00000527954 MAP1AP78559 2803 aaPredicted RBP13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 MTORP42345 2549 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 BIRC5O15392 142 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 SMPD2O60906 423 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 PRKCAP17252 672 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 ELK4P28324 431 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 ADH6P28332 368 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 AGTR1P30556 359 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 CASP9P55211 416 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 SUMO3P55854 103 aaPredicted RBP13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 GPR68Q15743 365 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 ZNF239Q16600 458 aaKnown RBP13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 SMU1Q2TAY7 513 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 GTF2IRD2BQ6EKJ0 949 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 GTF2IRD2Q86UP8 949 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 TMCO5AQ8N6Q1 288 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 RNF128Q8TEB7 428 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 PIGTQ969N2 578 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 REXO5Q96IC2 774 aaKnown RBP13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 SMR3AQ99954 134 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 PARD6BQ9BYG5 372 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 KCNE5Q9UJ90 142 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 GPC6Q9Y625 555 aaPredicted RBP13.54□□□□□ -0.24
EXOSC4-203ENST00000527954 RNF103-CHMP3A0A140T963 221 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 DUXAA6NLW8 204 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ZNF264O43296 627 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ARHGEF9O43307 516 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 KLF4O43474 513 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 FCMRO60667 390 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 NTN1O95631 604 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 PABPC4LP0CB38 370 aaKnown RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 UBL4AP11441 157 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 NID1P14543 1247 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 PPP3CBP16298 524 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 FPR1P21462 350 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 SLC1A6P48664 564 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 CCR4P51679 360 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 PDZK1Q5T2W1 519 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 SHEQ5VZ18 495 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 STK32CQ86UX6 486 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ANKRD46Q86W74 232 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 TUSC5Q8IXB3 177 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 TOR1AIP2Q8NFQ8 470 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 OR4A15Q8NGL6 344 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 OR5W2Q8NH69 310 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ABHD3Q8WU67 409 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ARSGQ96EG1 525 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 C18orf12Q96KH6 178 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 SLC35G5Q96KT7 338 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 SORT1Q99523 831 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 PIP5K1AQ99755 562 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 DPY30Q9C005 99 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 FANCFQ9NPI8 374 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 MKLN1Q9UL63 735 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 PCDHGB4Q9UN71 923 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 ABCA4P78363 2273 aa13.53□□□□□ -0.24
EXOSC4-203ENST00000527954 CENPVL1A0A0U1RR11 272 aa13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 SERINC4A6NH21 518 aa13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 GJE1A6NN92 205 aa13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 ESPNB1AK53 854 aa13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 RNASET2O00584 256 aaKnown RBP13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.25
EXOSC4-203ENST00000527954 SCN2BO60939 215 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms