RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ZNF117Q03924 483 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 SRYQ05066 204 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 COX20Q5RI15 118 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 C6orf10Q5SRN2 563 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 TYW3Q6IPR3 259 aaKnown RBP17.21■□□□□ 0.35
PKP3-204ENST00000526971 SLC2A7Q6PXP3 512 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 LACC1Q8IV20 430 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 OR5M1Q8NGP8 315 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 PNPT1Q8TCS8 783 aaKnown RBP17.21■□□□□ 0.35
PKP3-204ENST00000526971 TRIB1Q96RU8 372 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 RABEP2Q9H5N1 569 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 CALHM2Q9HA72 323 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 SLC52A3Q9NQ40 469 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 CCDC167Q9P0B6 97 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 KCNE5Q9UJ90 142 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 TRIM33Q9UPN9 1127 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 LIPT1Q9Y234 373 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 ZNF337Q9Y3M9 751 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 WDR45Q9Y484 360 aa17.21■□□□□ 0.35
PKP3-204ENST00000526971 NSD1Q96L73 2696 aaPredicted RBP17.2■□□□□ 0.34
PKP3-204ENST00000526971 A0A0G2JND7 137 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 SERINC4A6NH21 518 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 GTPBP1O00178 669 aaKnown RBP17.2■□□□□ 0.34
PKP3-204ENST00000526971 NR5A2O00482 541 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 OIP5O43482 229 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 KIAA0513O60268 411 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 TNFRSF21O75509 655 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 UGT2B17O75795 530 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 PEPDP12955 493 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 NCF2P19878 526 aaPredicted RBP17.2■□□□□ 0.34
PKP3-204ENST00000526971 UQCRC1P31930 480 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 TIMP3P35625 211 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 MVDP53602 400 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 GTDC1Q4AE62 458 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 AGKQ53H12 422 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 PDZK1Q5T2W1 519 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 CDC20BQ86Y33 519 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 ZNF614Q8N883 585 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 OIT3Q8WWZ8 545 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 SPDL1Q96EA4 605 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 TRNT1Q96Q11 434 aaKnown RBP17.2■□□□□ 0.34
PKP3-204ENST00000526971 KLHDC3Q9BQ90 382 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 PAIP1Q9H074 479 aaKnown RBP17.2■□□□□ 0.34
PKP3-204ENST00000526971 TPT1P8Q9HAU6 139 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 MED17Q9NVC6 651 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 ICAM5Q9UMF0 924 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 VDAC3Q9Y277 283 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 CARD8Q9Y2G2 431 aa17.2■□□□□ 0.34
PKP3-204ENST00000526971 CENPVL1A0A0U1RR11 272 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 C7orf72A4D263 438 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 A6NNC1 897 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 SHISA8B8ZZ34 492 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ZNF17P17021 662 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 CEACAM8P31997 349 aaPredicted RBP17.19■□□□□ 0.34
PKP3-204ENST00000526971 P2RX1P51575 399 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ZNF41P51814 821 aaPredicted RBP17.19■□□□□ 0.34
PKP3-204ENST00000526971 HPCAP84074 193 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 PLPPR5Q32ZL2 321 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 GPAT3Q53EU6 434 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 METTL21CQ5VZV1 264 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 POMZP3Q6PJE2 187 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 CBLN3Q6UW01 205 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 FRRS1Q6ZNA5 592 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ADGRE4PQ86SQ3 457 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ZNF619Q8N2I2 560 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 GTPBP8Q8N3Z3 284 aaPredicted RBP17.19■□□□□ 0.34
PKP3-204ENST00000526971 ANKFN1Q8N957 763 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 TNIP2Q8NFZ5 429 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ZBTB8AQ96BR9 441 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 AURKBQ96GD4 344 aaPredicted RBP17.19■□□□□ 0.34
PKP3-204ENST00000526971 UCN2Q96RP3 112 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 ZNF385DQ9H6B1 395 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 CCDC134Q9H6E4 229 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 PCDHB14Q9Y5E9 798 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 AP4B1Q9Y6B7 739 aa17.19■□□□□ 0.34
PKP3-204ENST00000526971 A0A096LPI6 279 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 MBD3L4A6NDZ8 208 aaPredicted RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 MBD3L3A6NE82 208 aaPredicted RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 MBD3L5A6NJ08 208 aaPredicted RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 HSPB2A8KAH6 182 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 SYT5O00445 386 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 ZNF264O43296 627 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 EIF4E2O60573 245 aaKnown RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 H6PDO95479 791 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 VIMP08670 466 aaKnown RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 TROVE2P10155 538 aaKnown RBP eCLIP17.18■□□□□ 0.34
PKP3-204ENST00000526971 UBL4AP11441 157 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 HOXB9P17482 250 aaPredicted RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 BMP5P22003 454 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 SUMO3P55854 103 aaPredicted RBP17.18■□□□□ 0.34
PKP3-204ENST00000526971 CHRNEQ04844 493 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 HSPB2Q16082 182 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 MAPK14Q16539 360 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 SYPL1Q16563 259 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 NDUFAF6Q330K2 333 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 MEIOBQ8N635 442 aa17.18■□□□□ 0.34
PKP3-204ENST00000526971 MBD3L2Q8NHZ7 208 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms