RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 DGLUCYQ7Z3D6 616 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 VRK2Q86Y07 508 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 RBM45Q8IUH3 476 aaKnown RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 EGFL6Q8IUX8 553 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 LACC1Q8IV20 430 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 SPACA3Q8IXA5 215 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 CLIP4Q8N3C7 705 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 OR9Q2Q8NGE9 314 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 OR52R1Q8NGF1 315 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 OR14A16Q8NHC5 309 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 VANGL1Q8TAA9 524 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 CNIH3Q8TBE1 160 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 FAR1Q8WVX9 515 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 DNAJA4Q8WW22 397 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 APH1BQ8WW43 257 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 RFKQ969G6 155 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 ZNF501Q96CX3 271 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 SLC41A3Q96GZ6 507 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 PEX11GQ96HA9 241 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 SENP5Q96HI0 755 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 LRFN5Q96NI6 719 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 SLC38A2Q96QD8 506 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 COPS4Q9BT78 406 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 ZNF426Q9BUY5 554 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 SLC19A3Q9BZV2 496 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 SPRTNQ9H040 489 aaPredicted RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 OR10A5Q9H207 317 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 FN3KQ9H479 309 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 C12orf10Q9HB07 376 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 ACOT13Q9NPJ3 140 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 EXOSC3Q9NQT5 275 aaKnown RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 UBQLN4Q9NRR5 601 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 FGF21Q9NSA1 209 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 STARD5Q9NSY2 213 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 ZNF226Q9NYT6 803 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 MUTYHQ9UIF7 546 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 PPIEQ9UNP9 301 aaKnown RBP6.95□□□□□ -1.3
CTR9-202ENST00000524523 BAIAP2Q9UQB8 552 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 PCDHGB2Q9Y5G2 931 aa6.95□□□□□ -1.3
CTR9-202ENST00000524523 MYOCOSA0A1B0GUC4 107 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 A0A1W2PQD3 144 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 FRG2CA6NGY1 282 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 PAX4O43316 350 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CHP2O43745 196 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 XPNPEP2O43895 674 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 FAM20BO75063 409 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 GABARAPO95166 117 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 RCBTB2O95199 551 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 IL33O95760 270 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 IGKV3-11P04433 115 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 TP53P04637 393 aaPredicted RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 GP1BAP07359 652 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CD63P08962 238 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CT62P0C5K7 136 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CT45A8P0DMV1 189 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CT45A9P0DMV2 189 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CKMT1AP12532 417 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CYP4B1P13584 511 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CAPZA2P47755 286 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 IDH2P48735 452 aaKnown RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 PCYT1AP49585 367 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 SLC37A1P57057 533 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 RHAGQ02094 409 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 PRKCDQ05655 676 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 FGFBP1Q14512 234 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 ZNF267Q14586 743 aaPredicted RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 IRF3Q14653 427 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 GPR68Q15743 365 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 NKPD1Q17RQ9 610 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 DEFB110Q30KQ9 67 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 HLA-BQ31612 363 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 TIMM50Q3ZCQ8 353 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 FLYWCH1Q4VC44 716 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 KLHL26Q53HC5 615 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CT45A2Q5DJT8 189 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 ARMC4Q5T2S8 1044 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 MRPL2Q5T653 305 aaKnown RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 MFSD4BQ5TF39 518 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 PLAG1Q6DJT9 500 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 ULK3Q6PHR2 472 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 ZNF836Q6ZNA1 936 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 DBX2Q6ZNG2 339 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 GDPGP1Q6ZNW5 385 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 PLEKHM3Q6ZWE6 761 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 GDF7Q7Z4P5 450 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 COMTD1Q86VU5 262 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 TMEM151BQ8IW70 566 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 CYP4Z2PQ8N1L4 340 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 MFSD4AQ8N468 514 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 RCBTB1Q8NDN9 531 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 OR1L3Q8NH93 324 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 C16orf52Q8NHV5 167 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 BRIX1Q8TDN6 353 aaKnown RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 PTPMT1Q8WUK0 201 aaPredicted RBP6.94□□□□□ -1.3
CTR9-202ENST00000524523 GGHQ92820 318 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 FGF11Q92914 225 aa6.94□□□□□ -1.3
CTR9-202ENST00000524523 TMIGD2Q96BF3 282 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms