RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SERINC3Q13530 473 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 CLINT1Q14677 625 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 RPE65Q16518 533 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 MS4A13Q5J8X5 152 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 ETV3LQ6ZN32 361 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 IKBIPQ70UQ0 350 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 FAM122BQ7Z309 247 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 SLC9B2Q86UD5 537 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF683Q8IZ20 524 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 KLHDC9Q8NEP7 349 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 OR52N2Q8NGI0 321 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 OR52I2Q8NH67 350 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-224ENST00000524126 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 SMIM4Q8WVI0 70 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 ECHDC3Q96DC8 303 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 CPNE2Q96FN4 548 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-224ENST00000524126 LRIG1Q96JA1 1093 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 FCRL4Q96PJ5 515 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPIDR-224ENST00000524126 MRPS18AQ9NVS2 196 aaKnown RBP9.5□□□□□ -0.89
SPIDR-224ENST00000524126 TMEM248Q9NWD8 314 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF629Q9UEG4 869 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-224ENST00000524126 Q9Y3F1 56 aa9.5□□□□□ -0.89
SPIDR-224ENST00000524126 TDRD15B5MCY1 1934 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 F5H5P2 479 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PGRMC2O15173 223 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SMAD9O15198 467 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ACTL6AO96019 429 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ANXA4P09525 319 aaPredicted RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 GAAP10253 952 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ATF1P18846 271 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 AHRP35869 848 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 RAE1P78406 368 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ACSM2AQ08AH3 577 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TGIF1Q15583 401 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 CSRP2Q16527 193 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SDHAF4Q5VUM1 108 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ACSM2BQ68CK6 577 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF322Q6U7Q0 402 aaPredicted RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 FAM151BQ6UXP7 276 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 MISPQ8IVT2 679 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 OR6V1Q8N148 313 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 APOBEC4Q8WW27 367 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ING5Q8WYH8 240 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TRMT61BQ9BVS5 477 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SLC38A1Q9H2H9 487 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PIGMQ9H3S5 423 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TMEM185BQ9H7F4 350 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 RDH14Q9HBH5 336 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 GKN1Q9NS71 199 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TAS2R5Q9NYW4 299 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SLC22A14Q9Y267 594 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 A0A0D9SEW6 157 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ZC3H12DA2A288 527 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TERTO14746 1132 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 FMO6PO60774 539 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 UBBP0CG47 229 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 UBCP0CG48 685 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 NQO2P16083 231 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 CD22P20273 847 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 DDX6P26196 483 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ATP6V1E1P36543 226 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 AKR1C3P42330 323 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 POU3F4P49335 361 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PNLIPRP2P54317 469 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 RPS27AP62979 156 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PITPNAQ00169 270 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 CDK5Q00535 292 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 MC1RQ01726 317 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SEMG2Q02383 582 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SLC3A1Q07837 685 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 PEA15Q15121 130 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 RNF212Q495C1 297 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF805Q5CZA5 627 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 SLC25A30Q5SVS4 291 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ARMC12Q5T9G4 340 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 LHX8Q68G74 356 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 FBXL22Q6P050 247 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 CEACAM19Q7Z692 300 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 MON1AQ86VX9 555 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TPRA1Q86W33 373 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 FAM98AQ8NCA5 519 aaKnown RBP9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TMEM41AQ96HV5 264 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 C14orf144Q96I85 54 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 UCK1Q9HA47 277 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
SPIDR-224ENST00000524126 DOCK4Q8N1I0 1966 aa9.48□□□□□ -0.89
SPIDR-224ENST00000524126 CASP8AP2Q9UKL3 1982 aa9.48□□□□□ -0.89
SPIDR-224ENST00000524126 A0A0A6YYC8 382 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-224ENST00000524126 A0A1W2PQH9 124 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms