RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SLC18A1P54219 525 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 CTBP2P56545 445 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 PHC1P78364 1004 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 GPR68Q15743 365 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 ARHGAP11BQ3KRB8 267 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 FAM174BQ3ZCQ3 159 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 SPANXN4Q5MJ08 99 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 PDZK1Q5T2W1 519 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 ATAD3BQ5T9A4 648 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 C16orf62Q7Z3J2 963 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 TMCO5AQ8N6Q1 288 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 TOR1AIP2Q8NFQ8 470 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 RAB3IL1Q8TBN0 382 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 MGARPQ8TDB4 240 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 GMPPAQ96IJ6 420 aaPredicted RBP14.55□□□□□ -0.08
CLN8-206ENST00000523237 KLHL15Q96M94 604 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 FOXC2Q99958 501 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 OR51I1Q9H343 314 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 GLRX2Q9NS18 164 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 NKIRAS1Q9NYS0 192 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 TESMINQ9Y4I5 508 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 TEP1Q99973 2627 aaKnown RBP14.55□□□□□ -0.08
CLN8-206ENST00000523237 HIVEP1P15822 2718 aa14.55□□□□□ -0.08
CLN8-206ENST00000523237 HEATR5AQ86XA9 2040 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 MED13LQ71F56 2210 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 SERINC4A6NH21 518 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 GJE1A6NN92 205 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 SDHDO14521 159 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ZNF195O14628 629 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 HDAC3O15379 428 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 OIP5O43482 229 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 HRGP04196 525 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ALDOCP09972 364 aaKnown RBP14.54□□□□□ -0.08
CLN8-206ENST00000523237 IL11P20809 199 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 S100A3P33764 101 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 SFTPDP35247 375 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 UGT2B10P36537 528 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 CARD18P57730 90 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 MAGOHP61326 146 aaKnown RBP14.54□□□□□ -0.08
CLN8-206ENST00000523237 CASP8Q14790 479 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ZNF141Q15928 474 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 NDUFAF6Q330K2 333 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ATG16L1Q676U5 607 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 GTF2IRD2BQ6EKJ0 949 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 SPATA19Q7Z5L4 167 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 GTF2IRD2Q86UP8 949 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ZNF610Q8N9Z0 462 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 OR6K3Q8NGY3 331 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 OR5W2Q8NH69 310 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 RFWD2Q8NHY2 731 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 GPR119Q8TDV5 335 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 OSTF1Q92882 214 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ZNF350Q9GZX5 532 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 TIGARQ9NQ88 270 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 PLSCR4Q9NRQ2 329 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 AIG1Q9NVV5 245 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 ZNF226Q9NYT6 803 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 MKLN1Q9UL63 735 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 PLEKHA6Q9Y2H5 1048 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 AKAP6Q13023 2319 aa14.54□□□□□ -0.08
CLN8-206ENST00000523237 SLCO1B7G3V0H7 640 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 C16orf97H3BN30 126 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 FCMRO60667 390 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 SS18L1O75177 396 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 SNNO75324 88 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 OR12D1P0DN82 309 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 PRKCAP17252 672 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CHI3L1P36222 383 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 CCR4P51679 360 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CASP9P55211 416 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 NME5P56597 212 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CBFBQ13951 182 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 POU4F3Q15319 338 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 BEND6Q5SZJ8 279 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 SAXO2Q658L1 398 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 HEPHL1Q6MZM0 1159 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 TNFAIP8L2Q6P589 184 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 PAMR1Q6UXH9 720 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 XAGE5Q8WWM1 108 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CPNE4Q96A23 557 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 ARSGQ96EG1 525 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 NEURL3Q96EH8 262 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 REXO5Q96IC2 774 aaKnown RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 MRGPRX4Q96LA9 322 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CCDC115Q96NT0 180 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 WFIKKN1Q96NZ8 548 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 SLC35A5Q9BS91 424 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 MED18Q9BUE0 208 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CXXC4Q9H2H0 198 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 POLE3Q9NRF9 147 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 KLHL28Q9NXS3 571 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 MARCOQ9UEW3 520 aaPredicted RBP14.53□□□□□ -0.08
CLN8-206ENST00000523237 BTNL2Q9UIR0 455 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 CLEC4AQ9UMR7 237 aa14.53□□□□□ -0.08
CLN8-206ENST00000523237 GOLGA8QA0A0J9YX86 632 aa14.52□□□□□ -0.09
CLN8-206ENST00000523237 GOLGA8OA6NCC3 632 aa14.52□□□□□ -0.09
CLN8-206ENST00000523237 GOLGA8NF8WBI6 632 aa14.52□□□□□ -0.09
CLN8-206ENST00000523237 UGT2B17O75795 530 aa14.52□□□□□ -0.09
CLN8-206ENST00000523237 CYP7B1O75881 506 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms