RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 IDSP22304 550 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 PBLDP30039 288 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 IL2RGP31785 369 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 UGT1A5P35504 534 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 ACVR1BP36896 505 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 NUCB2P80303 420 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 VLDLRP98155 873 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 TNFRSF17Q02223 184 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 PUDPQ08623 228 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 RUNX3Q13761 415 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 MESDQ14696 234 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 GANABQ14697 944 aaKnown RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC15A2Q16348 729 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 NDUFA9Q16795 377 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 SPINK14Q6IE38 97 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 BLOC1S2Q6QNY1 142 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 Q6ZPB1 254 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 MOB3BQ86TA1 216 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 LCA5Q86VQ0 697 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 TMEM123Q8N131 208 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR5D13Q8NGL4 314 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR13C2Q8NGS9 318 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 RASL10AQ92737 203 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 TADA1Q96BN2 335 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZBED6CLQ96FA7 236 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 SDSLQ96GA7 329 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 PPP1R16AQ96I34 528 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 CELF6Q96J87 481 aaKnown RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 FOXN4Q96NZ1 517 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 TMEM43Q9BTV4 400 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 VCX2Q9H322 139 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 PNO1Q9NRX1 252 aaKnown RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 DCAF16Q9NXF7 216 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 C6orf203Q9P0P8 240 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 HPCAL4Q9UM19 191 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 OARD1Q9Y530 152 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 IKBKGQ9Y6K9 419 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 LAMC3Q9Y6N6 1575 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 PNPLA6Q8IY17 1366 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 FRMPD3Q5JV73 1810 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 A0A087WWV3 80 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 IGHV2-70DA0A0C4DH43 119 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 A0A1W2PPE3 182 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR6C65A6NJZ3 312 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 SNX4O95219 450 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 FASP25445 335 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 HMGCLP35914 325 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 HMGCS2P54868 508 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 CXCL6P80162 114 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 MXD4Q14582 209 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 ZNF239Q16600 458 aaKnown RBP3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC25A52Q3SY17 297 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 TEX44Q53QW1 395 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 SFT2D3Q587I9 215 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 C1orf220Q5T0J3 134 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 TMEM225Q6GV28 225 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 ERICH1Q86X53 443 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC38A6Q8IZM9 456 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 SPAG16Q8N0X2 631 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 DHRSXQ8N5I4 330 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 CSNK1A1LQ8N752 337 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR2T33Q8NG76 320 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 VN1R17PQ8TDU5 208 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 TOMM40LQ969M1 308 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 ZBTB18Q99592 522 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 RHBGQ9H310 441 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 LRRN3Q9H3W5 708 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 FN3KRPQ9HA64 309 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 TIGARQ9NQ88 270 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 RPH3ALQ9UNE2 315 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 RRP15Q9Y3B9 282 aaKnown RBP3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 AK6Q9Y3D8 172 aaKnown RBP3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 HMGXB3Q12766 1538 aa3.52□□□□□ -1.85
HMGB1P1-201ENST00000522557 E9PAM4 449 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 H3BMQ9 156 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 BCL2L11O43521 198 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 CABYRO75952 493 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 PNMTP11086 282 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 CAPN2P17655 700 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 NMT1P30419 496 aaKnown RBP3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 NOVP48745 357 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 EFNB2P52799 333 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 MS4A2Q01362 244 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 KCNJ11Q14654 390 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 PRR4Q16378 134 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 CFAP221Q4G0U5 840 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 MEDAGQ5VYS4 303 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 PAMR1Q6UXH9 720 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 ZYG11AQ6WRX3 759 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 SYT10Q6XYQ8 523 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 APTXQ7Z2E3 356 aaKnown RBP3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 SERINC5Q86VE9 423 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 NAXDQ8IW45 347 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 TRPV1Q8NER1 839 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 TFB1MQ8WVM0 346 aaKnown RBP3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 N4BP2L2Q92802 583 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms