RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SNTA1Q13424 505 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 RIPK1Q13546 671 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 ENTPD8Q5MY95 495 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 SLC30A6Q6NXT4 461 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 TMEM81Q6P7N7 255 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 BORAQ6PGQ7 559 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 WDSUB1Q8N9V3 476 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 MDS2Q8NDY4 140 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 PHF10Q8WUB8 498 aaKnown RBP12.21□□□□□ -0.46
CLK4-210ENST00000522136 SLC39A7Q92504 469 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 NTNG2Q96CW9 530 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.46
CLK4-210ENST00000522136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.46
CLK4-210ENST00000522136 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 SACM1LQ9NTJ5 587 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.46
CLK4-210ENST00000522136 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 ICAM5Q9UMF0 924 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.46
CLK4-210ENST00000522136 FREM3P0C091 2139 aa12.21□□□□□ -0.46
CLK4-210ENST00000522136 LAMA5O15230 3695 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 K7EM74 188 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 EIF4E2O60573 245 aaKnown RBP12.2□□□□□ -0.46
CLK4-210ENST00000522136 LINGO3P0C6S8 592 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 FASP25445 335 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 IST1P53990 364 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 EPS8Q12929 822 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 TOMM34Q15785 309 aaPredicted RBP12.2□□□□□ -0.46
CLK4-210ENST00000522136 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 OR2T5Q6IEZ7 315 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 IGFL2Q6UWQ7 119 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 ZNF550Q7Z398 422 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 PQLC1Q8N2U9 271 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 OR2T29Q8NH02 315 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 B4GALNT2Q8NHY0 566 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 JSRP1Q96MG2 331 aaPredicted RBP12.2□□□□□ -0.46
CLK4-210ENST00000522136 DSN1Q9H410 356 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 YY1AP1Q9H869 796 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
CLK4-210ENST00000522136 SDHAF3Q9NRP4 125 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 AGPAT4Q9NRZ5 378 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 FBXL2Q9UKC9 423 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 CACNA1GO43497 2377 aa12.2□□□□□ -0.46
CLK4-210ENST00000522136 PINLYPA6NC86 204 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 CLOCKO15516 846 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 CDC40O60508 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLK4-210ENST00000522136 PRSS23O95084 383 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 WISP1O95388 367 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 NTN1O95631 604 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 NUDT14O95848 222 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 PDGFAP04085 211 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 THY1P04216 161 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ITGA2P17301 1181 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 RHCEP18577 417 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 CNR1P21554 472 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 RRM2P31350 389 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 IDH2P48735 452 aaKnown RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 P2RX1P51575 399 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 SESN3P58005 492 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 OR1Q1Q15612 314 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ATP6AP1Q15904 470 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 RANBP3LQ86VV4 465 aaPredicted RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 MISPQ8IVT2 679 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ZNF440Q8IYI8 595 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 CADM2Q8N3J6 435 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 OR52J3Q8NH60 311 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 OR5W2Q8NH69 310 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ADAMTS16Q8TE57 1224 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 FRMD6Q96NE9 622 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 RNF32Q9H0A6 362 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 NTN4Q9HB63 628 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 STX18Q9P2W9 335 aaKnown RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 RIMS3Q9UJD0 308 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 U3KQV3 271 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 GNGT2O14610 69 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 LDLRP01130 860 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 SP1P08047 785 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 MASP1P48740 699 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 TAS2R41P59536 307 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 SPIBQ01892 262 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 TMEM179BQ7Z7N9 219 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 SULF2Q8IWU5 870 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 OR2M3Q8NG83 312 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 ZNF559Q9BR84 538 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 NMNAT1Q9HAN9 279 aaPredicted RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 DNAJB9Q9UBS3 223 aa12.19□□□□□ -0.46
CLK4-210ENST00000522136 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
CLK4-210ENST00000522136 TRIM3O75382 744 aaPredicted RBP12.18□□□□□ -0.46
CLK4-210ENST00000522136 DEAF1O75398 565 aaPredicted RBP12.18□□□□□ -0.46
CLK4-210ENST00000522136 SNX4O95219 450 aa12.18□□□□□ -0.46
CLK4-210ENST00000522136 HOXB6P17509 224 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms