RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 OIP5O43482 229 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 WDR1O75083 606 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PABPC4LP0CB38 370 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 GABRA1P14867 456 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 CPN1P15169 458 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PGCP20142 388 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ADH6P28332 368 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PCGF2P35227 344 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PTGER4P35408 488 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 EIF1P41567 113 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 SLC6A8P48029 635 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 NUDT2P50583 147 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 RNF144AP50876 292 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PCBP3P57721 371 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PLAURQ03405 335 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ART3Q13508 389 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 KRT72Q14CN4 511 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 BCL2A1Q16548 175 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 VMACQ2NL98 169 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 NDUFAF6Q330K2 333 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 EMC4Q5J8M3 183 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 MRPL2Q5T653 305 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 RAET1LQ5VY80 246 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ERICH5Q6P6B1 374 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ZGRF1Q86YA3 2104 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ZZZ3Q8IYH5 903 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF440Q8IYI8 595 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 GTPBP8Q8N3Z3 284 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 TMCO5AQ8N6Q1 288 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 SLC35B4Q969S0 331 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 REXO5Q96IC2 774 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF607Q96SK3 696 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 PNPLA3Q9NST1 481 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 DNAJB12Q9NXW2 375 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 TAGLN3Q9UI15 199 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 RPH3AQ9Y2J0 694 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 GPC6Q9Y625 555 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-226ENST00000521368 OR2M5A3KFT3 312 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 PRORSD1PA6NEY8 169 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 CLDN24A6NM45 220 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 E9PLN8 166 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 FAAHO00519 579 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNHIT1O43257 154 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 LRRTM2O43300 516 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 GMFGO60234 142 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 NUDT14O95848 222 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ELK4P28324 431 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 PRKAR1BP31321 381 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 LHX2P50458 406 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 DLX5P56178 289 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 PER3P56645 1201 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■■ 27.7
CTNNA1-226ENST00000521368 SLC25A53Q5H9E4 307 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 DCST1Q5T197 706 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 INTS11Q5TA45 600 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 MTFR2Q6P444 385 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF836Q6ZNA1 936 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 HMGN2P46Q86SG4 172 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 VRK2Q86Y07 508 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 FITM2Q8N6M3 262 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 BHLHE22Q8NFJ8 381 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 PHF10Q8WUB8 498 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 TMEM234Q8WY98 164 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ST8SIA1Q92185 356 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 WDYHV1Q96HA8 205 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 MRGPRX4Q96LA9 322 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF583Q96ND8 569 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 KLHDC3Q9BQ90 382 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 VKORC1Q9BQB6 163 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 STOML1Q9UBI4 398 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 TNFRSF10DQ9UBN6 386 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 MEMO1Q9Y316 297 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 AP4B1Q9Y6B7 739 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF407Q9C0G0 2248 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 FREM3P0C091 2139 aa12.47□□□□□ -0.41
CTNNA1-226ENST00000521368 SVILO95425 2214 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 ESPL1Q14674 2120 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 FAM220BPB1ANY3 271 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 CCL21O00585 134 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 BCAS1O75363 584 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 SERPINB7O75635 380 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 CYP7B1O75881 506 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 NTN1O95631 604 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 PEPDP12955 493 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 ZNF708P17019 499 aa12.46□□□□□ -0.41
CTNNA1-226ENST00000521368 PRKCAP17252 672 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms