RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 MLC1Q15049 377 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 TSC22D1Q15714 1073 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 TMEM176BQ3YBM2 270 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 CLEC6AQ6EIG7 209 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 PODNL1Q6PEZ8 512 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 RNF165Q6ZSG1 346 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 BHLHA15Q7RTS1 189 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 R3HCC1LQ7Z5L2 792 aaKnown RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF619Q8N2I2 560 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 FBXO27Q8NI29 283 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 FAM120BQ96EK7 910 aaKnown RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 CHMP6Q96FZ7 201 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 TRIM2Q9C040 744 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 GRIP2Q9C0E4 1043 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 PIGUQ9H490 435 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ALG2Q9H553 416 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
PRKDC-204ENST00000521331 FAIMQ9NVQ4 179 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 OXSMQ9NWU1 459 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 KLHL9Q9P2J3 617 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 PTGDR2Q9Y5Y4 395 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 PRR14LQ5THK1 2151 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 AZIN1O14977 448 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 PLIN3O60664 434 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 NTN1O95631 604 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 CHEK2O96017 543 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 IGHV4-39P01824 125 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
PRKDC-204ENST00000521331 CCT5P48643 541 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 P2RX1P51575 399 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 RPL38P63173 70 aaKnown RBP13.21□□□□□ -0.29
PRKDC-204ENST00000521331 FAPQ12884 760 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 SELENBP1Q13228 472 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.29
PRKDC-204ENST00000521331 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 KLHL26Q53HC5 615 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 LIPMQ5VYY2 423 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 LRIG3Q6UXM1 1119 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 DNM1P46Q6ZS02 220 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 Q6ZSR9 355 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 Q6ZT83 130 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 CCDC63Q8NA47 563 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 CLHC1Q8NHS4 586 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 ZFP90Q8TF47 636 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 NEUROG1Q92886 237 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 OTUB1Q96FW1 271 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-204ENST00000521331 HS6ST2Q96MM7 605 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-204ENST00000521331 BCO1Q9HAY6 547 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 BAIAP2L1Q9UHR4 511 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 ABCA1O95477 2261 aa13.21□□□□□ -0.29
PRKDC-204ENST00000521331 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 DPRXA6NFQ7 191 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 RNF212BA8MTL3 300 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
PRKDC-204ENST00000521331 EFNA2O43921 213 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 KRT16P08779 473 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CPA3P15088 417 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 SLC7A1P30825 629 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CRHR1P34998 444 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 HPCAL1P37235 193 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 OR3A2P47893 321 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 RAC3P60763 192 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 RFTN2Q52LD8 501 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CBLN3Q6UW01 205 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CDS1Q92903 461 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 ARL8AQ96BM9 186 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 MUCL1Q96DR8 90 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 MRGPRX4Q96LA9 322 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 TRMOQ9BU70 441 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 SIRT3Q9NTG7 399 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CISD1Q9NZ45 108 aaKnown RBP13.2□□□□□ -0.3
PRKDC-204ENST00000521331 ICAM5Q9UMF0 924 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CARD8Q9Y2G2 431 aa13.2□□□□□ -0.3
PRKDC-204ENST00000521331 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
PRKDC-204ENST00000521331 ANK3Q12955 4377 aaKnown RBP13.19□□□□□ -0.3
PRKDC-204ENST00000521331 ZNF814B7Z6K7 855 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
PRKDC-204ENST00000521331 ADAM11O75078 769 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 LINC00032P0C843 101 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 PRKCAP17252 672 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 ENPP1P22413 925 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 RPL3P39023 403 aaKnown RBP13.19□□□□□ -0.3
PRKDC-204ENST00000521331 PPA1Q15181 289 aa13.19□□□□□ -0.3
PRKDC-204ENST00000521331 STK11Q15831 433 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms