RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HSP90B2PQ58FF3 399 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 MEX3BQ6ZN04 569 aaKnown RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 CHMP1BQ7LBR1 199 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 HMGN2P46Q86SG4 172 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 GGNQ86UU5 652 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 ARFGAP2Q8N6H7 521 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 TMCO5AQ8N6Q1 288 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 GPR119Q8TDV5 335 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 SPDL1Q96EA4 605 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 TREX2Q9BQ50 279 aaPredicted RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 PAIP1Q9H074 479 aaKnown RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 RUBCNLQ9H714 662 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 SLC52A3Q9NQ40 469 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 APCP25054 2843 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 CSTAP01040 98 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 CHRM4P08173 479 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 CD1EP15812 388 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 CAPN3P20807 821 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 IL11P20809 199 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 EIF1P41567 113 aaKnown RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 MAGEA8P43361 318 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 CCR4P51679 360 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 IRX1P78414 480 aaPredicted RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 FOXF2Q12947 444 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 FGFBP1Q14512 234 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 AGKQ53H12 422 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 EIF3MQ7L2H7 374 aaKnown RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 MCEMP1Q8IX19 187 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 METTL25Q8N6Q8 603 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 OR5W2Q8NH69 310 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 OIT3Q8WWZ8 545 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF524Q96C55 264 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 INTS12Q96CB8 462 aaKnown RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF845Q96IR2 970 aaPredicted RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 ZFP3Q96NJ6 502 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 SIKE1Q9BRV8 207 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 PINK1Q9BXM7 581 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 LAT2Q9GZY6 243 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 QRSL1Q9H0R6 528 aaKnown RBP18.59■□□□□ 0.57
TRIM35-203ENST00000521253 SLC38A1Q9H2H9 487 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 TMEM185BQ9H7F4 350 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 MED4Q9NPJ6 270 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 TMEM45AQ9NWC5 275 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 STOML1Q9UBI4 398 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 PCDHB14Q9Y5E9 798 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 LRBAP50851 2863 aa18.59■□□□□ 0.57
TRIM35-203ENST00000521253 A0A0G2JND7 137 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 SLC22A20A6NK97 555 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 EIF1AYO14602 144 aaKnown RBP18.58■□□□□ 0.56
TRIM35-203ENST00000521253 BCAS1O75363 584 aaPredicted RBP18.58■□□□□ 0.56
TRIM35-203ENST00000521253 CYP7B1O75881 506 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 IL18BPO95998 194 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 OPN1LWP04000 364 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 UBTFL6P0CB48 400 aaPredicted RBP18.58■□□□□ 0.56
TRIM35-203ENST00000521253 NR2F1P10589 423 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 ETFAP13804 333 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 HOXB9P17482 250 aaPredicted RBP18.58■□□□□ 0.56
TRIM35-203ENST00000521253 NCF2P19878 526 aaPredicted RBP18.58■□□□□ 0.56
TRIM35-203ENST00000521253 OPRM1P35372 400 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 CRATP43155 626 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 RAC1P63000 192 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 MAPK11Q15759 364 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 LRRC74BQ6ZQY2 392 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 P4HA3Q7Z4N8 544 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 GCNT2Q8N0V5 402 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 TOR1AIP2Q8NFQ8 470 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 FBXO27Q8NI29 283 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 FIG4Q92562 907 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 ARSGQ96EG1 525 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 TRIM8Q9BZR9 551 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 TACC2O95359 2948 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 CACNA1DQ01668 2161 aa18.58■□□□□ 0.56
TRIM35-203ENST00000521253 INTS1Q8N201 2190 aaKnown RBP18.57■□□□□ 0.56
TRIM35-203ENST00000521253 A0A096LPI6 279 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 PRKCAP17252 672 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 ADH6P28332 368 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 PGM1P36871 562 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 RPS3AP61247 264 aaKnown RBP18.57■□□□□ 0.56
TRIM35-203ENST00000521253 CBFBQ13951 182 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 PON3Q15166 354 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 QPRTQ15274 297 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 PAGE3Q5JUK9 113 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 ZNF295-AS1Q8N0V1 137 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 FAM71CQ8NEG0 241 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 FNDC9Q8TBE3 224 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 ADGRG7Q96K78 797 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 THUMPD3Q9BV44 507 aaKnown RBP18.57■□□□□ 0.56
TRIM35-203ENST00000521253 SFXN3Q9BWM7 321 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 RABEP2Q9H5N1 569 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 ZNF385DQ9H6B1 395 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 SLAMF8Q9P0V8 285 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 P2RX2Q9UBL9 471 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 TRIM33Q9UPN9 1127 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 SLC35A3Q9Y2D2 325 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 ZNF175Q9Y473 711 aa18.57■□□□□ 0.56
TRIM35-203ENST00000521253 GPC6Q9Y625 555 aaPredicted RBP18.57■□□□□ 0.56
TRIM35-203ENST00000521253 DOCK7Q96N67 2140 aa18.56■□□□□ 0.56
TRIM35-203ENST00000521253 AGAP5A6NIR3 686 aa18.56■□□□□ 0.56
TRIM35-203ENST00000521253 CLDN24A6NM45 220 aa18.56■□□□□ 0.56
TRIM35-203ENST00000521253 ADAMDEC1O15204 470 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms