RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 SEPT4O43236 478 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ACP5P13686 325 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 HPGDP15428 266 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 AOAHP28039 575 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ASMTP46597 345 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 HCCSP53701 268 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM44Q2T9K0 475 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 JMJD6Q6NYC1 403 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ARRDC1Q8N5I2 433 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ZSCAN1Q8NBB4 408 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 NINQ8N4C6 2090 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 IMPA2O14732 288 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 PPIHO43447 177 aaKnown RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 NDUFB6O95139 128 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ETHE1O95571 254 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ANXA4P09525 319 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TYRP1P17643 537 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 CD22P20273 847 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 AGAP20933 346 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 PAX6P26367 422 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 HTR2AP28223 471 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 HTR5AP47898 357 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 RPIAP49247 311 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 LRRC74AQ0VAA2 488 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 NFATC2Q13469 925 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TIGD5Q53EQ6 642 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ENTPD8Q5MY95 495 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 SLC36A1Q7Z2H8 476 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 CEACAM19Q7Z692 300 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 IQCHQ86VS3 1027 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 MEX3DQ86XN8 651 aaKnown RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 OR4K5Q8NGD3 323 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 RHOVQ96L33 236 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TIMP4Q99727 224 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 A4GNTQ9UNA3 340 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM272A0A1B0GTI8 110 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 TRAPPC13A5PLN9 417 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 LGALS2P05162 132 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF7P17097 686 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 STAT5AP42229 794 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SLC6A12P48065 614 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 PIN1Q13526 163 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 DDX39BQ13838 428 aaKnown RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 DEFB115Q30KQ5 88 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 FBXL22Q6P050 247 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SERPINA9Q86WD7 417 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 TCTEX1D2Q8WW35 142 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 BHLHE41Q9C0J9 482 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 ACKR4Q9NPB9 350 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SH3BGRLO75368 114 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SLC34A2O95436 690 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 ATP1B1P05026 303 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 ASGR2P07307 311 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF8P17098 575 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 TRHRP34981 398 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 AP3S2P59780 193 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SLC3A1Q07837 685 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 CHIT1Q13231 466 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 REEP3Q6NUK4 255 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 C1orf94Q6P1W5 598 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 TSSK4Q6SA08 328 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 THEM5Q8N1Q8 247 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 SIRT6Q8N6T7 355 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 BBS1Q8NFJ9 593 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 PXYLP1Q8TE99 480 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 PHYHIPLQ96FC7 376 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 JAM3Q9BX67 310 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
PABPC1-208ENST00000519004 GOLGB1Q14789 3259 aaKnown RBP12.62□□□□□ -0.39
PABPC1-208ENST00000519004 A0A0D9SG52 128 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 INSIG1O15503 277 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 LILRB5O75023 590 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 SMIM11AP58511 58 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 CHAF1BQ13112 559 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 DOC2AQ14183 400 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 SSX2Q16385 188 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MAPK14Q16539 360 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms