RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF264O43296 627 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 CYP7B1O75881 506 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 TNFSF13O75888 250 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 AQP8O94778 261 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 NUDT14O95848 222 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 AK1P00568 194 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 NUDT7P0C024 238 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 UBTFL6P0CB48 400 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 UBL4AP11441 157 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF17P17021 662 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 PRKCAP17252 672 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 PGM1P36871 562 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 MRPL19P49406 292 aaKnown RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 CCR4P51679 360 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 SKP2Q13309 424 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 FGFBP1Q14512 234 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 PON3Q15166 354 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ATAD3BQ5T9A4 648 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 VWA1Q6PCB0 445 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 MTERF4Q7Z6M4 381 aaKnown RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 MSRB3Q8IXL7 192 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 C10orf111Q8N326 155 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 MEIOBQ8N635 442 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 TMCO5AQ8N6Q1 288 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 METTL25Q8N6Q8 603 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF527Q8NB42 609 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 THUMPD3Q9BV44 507 aaKnown RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 TPT1P8Q9HAU6 139 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 NPHS2Q9NP85 383 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 SLC25A37Q9NYZ2 338 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 CCDC167Q9P0B6 97 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF629Q9UEG4 869 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 PCDHB14Q9Y5E9 798 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 AP4B1Q9Y6B7 739 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 APCP25054 2843 aa11.96□□□□□ -0.5
VEGFA-219ENST00000518824 TEX15Q9BXT5 2789 aa11.96□□□□□ -0.5
VEGFA-219ENST00000518824 A0A1W2PNV4 684 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 C7orf72A4D263 438 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 EEF1E1-BLOC1S5C9J1V9 151 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 FAM47E-STBD1D6RA91 191 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 SYT5O00445 386 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 NR5A2O00482 541 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 DVL2O14641 736 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 EEF1E1O43324 174 aaKnown RBP11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CXCL13O43927 109 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 SOX30O94993 753 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 NTN1O95631 604 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CSTAP01040 98 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 KLK2P20151 261 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 UQCRC1P31930 480 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 SFTPDP35247 375 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 EIF1AXP47813 144 aaKnown RBP11.95□□□□□ -0.5
VEGFA-219ENST00000518824 ASCL1P50553 236 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 QPRTQ15274 297 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 SF3B4Q15427 424 aaKnown RBP eCLIP11.95□□□□□ -0.52e-10■■■□□ 18
VEGFA-219ENST00000518824 AGKQ53H12 422 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-219ENST00000518824 C6orf10Q5SRN2 563 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 AP1ARQ63HQ0 302 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CGB2Q6NT52 195 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 BLOC1S3Q6QNY0 202 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 LUZP2Q86TE4 346 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 ATP6V1C2Q8NEY4 427 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 OR5W2Q8NH69 310 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 OR10D3Q8NH80 312 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CNOT9Q92600 299 aaKnown RBP11.95□□□□□ -0.5
VEGFA-219ENST00000518824 ZBTB8AQ96BR9 441 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 DTNBP1Q96EV8 351 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 ITCHQ96J02 903 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 TM9SF2Q99805 663 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-219ENST00000518824 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF385DQ9H6B1 395 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 JKAMPQ9P055 326 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CLEC4AQ9UMR7 237 aa11.95□□□□□ -0.5
VEGFA-219ENST00000518824 CSMD1Q96PZ7 3565 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 UQCRHLA0A096LP55 91 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 H3BNH8 94 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 AP3D1O14617 1153 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 EIF4E2O60573 245 aaKnown RBP11.94□□□□□ -0.5
VEGFA-219ENST00000518824 DNAJA2O60884 412 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 ZCCHC18P0CG32 403 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 KIR2DL2P43627 348 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-219ENST00000518824 STX1BP61266 288 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 RAC1P63000 192 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 SIRPAP78324 504 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 TLE4Q04727 773 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 P4HA3Q7Z4N8 544 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 GDF7Q7Z4P5 450 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 BTLAQ7Z6A9 289 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 TRIML2Q8N7C3 387 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 STARD4Q96DR4 205 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 SPDL1Q96EA4 605 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 SRXN1Q9BYN0 137 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms