RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LYZP61626 148 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 OC90Q02509 493 aaPredicted RBP3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 RIPPLY1Q0D2K3 151 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 EGFEM1PQ0D2K5 195 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 CUL1Q13616 776 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 AANATQ16613 207 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 METTL11BQ5VVY1 283 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 LRRC43Q8N309 656 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 C15orf54Q8N8G6 183 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 OR10H4Q8NGA5 316 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 OR51G2Q8NGK0 314 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 AENQ8WTP8 325 aaKnown RBP3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 FAM3CQ92520 227 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 SYAP1Q96A49 352 aaPredicted RBP3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 C12orf66Q96MD2 445 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 IL4I1Q96RQ9 567 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 PLEKHF1Q96S99 279 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 RNF126Q9BV68 326 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 TPPP3Q9BW30 176 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 GLIPR2Q9H4G4 154 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 FANCFQ9NPI8 374 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 GNG12Q9UBI6 72 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 SH3BGRL2Q9UJC5 107 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 ZNF256Q9Y2P7 627 aaPredicted RBP3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 ATP6V0A2Q9Y487 856 aa3.61□□□□□ -1.83
HMGCS1-207ENST00000514610 TUBAL3A6NHL2 446 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 B4DXG7 233 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SEMG1P04279 462 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 OR8U8P0C7N1 319 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 PGCP20142 388 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 PSMB1P20618 241 aaKnown RBP3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 ADSSP30520 456 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 CD80P33681 288 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 GCKP35557 465 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 KIR2DS2P43631 304 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 EFNA3P52797 238 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 STX17P56962 302 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SNTB2Q13425 540 aaKnown RBP3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 GGTA1PQ4G0N0 100 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 CES3Q6UWW8 571 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 TFAP2EQ6VUC0 442 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SH2D6Q7Z4S9 175 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 ZDHHC21Q8IVQ6 265 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SKA3Q8IX90 412 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 SPRYD4Q8WW59 207 aaPredicted RBP3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 RSPH1Q8WYR4 309 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 RAB7BQ96AH8 199 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 TECTBQ96PL2 329 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 CRNKL1Q9BZJ0 848 aaKnown RBP3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 RAB33BQ9H082 229 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 EHD1Q9H4M9 534 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 B3GNT2Q9NY97 397 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 CGNQ9P2M7 1197 aaKnown RBP3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 ZNF221Q9UK13 617 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 MAB21L2Q9Y586 359 aa3.6□□□□□ -1.83
HMGCS1-207ENST00000514610 XPO1O14980 1071 aaKnown RBP3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 LYPLA1O75608 230 aaPredicted RBP3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 GCFC2P16383 781 aaKnown RBP3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 UQCRC2P22695 453 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 SOX6P35712 828 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 HPCAL1P37235 193 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 LRRC36Q1X8D7 754 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 SLC36A3Q495N2 470 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 BLOC1S2Q6QNY1 142 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 TGIF2LYQ8IUE0 185 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 TEX9Q8N6V9 391 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 PNPT1Q8TCS8 783 aaKnown RBP3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 C16orf74Q96GX8 76 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 TMEM117Q9H0C3 514 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 ELOVL3Q9HB03 270 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 SIGLEC8Q9NYZ4 499 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 CHD4Q14839 1912 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 FRMPD4Q14CM0 1322 aa3.59□□□□□ -1.83
HMGCS1-207ENST00000514610 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 SMIM28A0A1B0GU29 152 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 A8MUI8 341 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 G3V4G9 280 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 ANGPT2O15123 496 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 MSH4O15457 936 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 NOL3O60936 208 aaKnown RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 BCAS1O75363 584 aaPredicted RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 CYP2B6P20813 491 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 SELPLGQ14242 412 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 NADK2Q4G0N4 442 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 ATF7IP2Q5U623 682 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 FAM71F2Q6NXP2 309 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 HSD17B13Q7Z5P4 300 aaPredicted RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 LINC01006Q8NI28 216 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 PAQR8Q8TEZ7 354 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 FGGYQ96C11 551 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 PHYHIPLQ96FC7 376 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 MAGEB18Q96M61 343 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 RIT2Q99578 217 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 ISG20L2Q9H9L3 353 aaKnown RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 FARSBQ9NSD9 589 aaKnown RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms