RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 POLDIP2Q9Y2S7 368 aa5.75□□□□□ -1.49
NUP54-215ENST00000514313 SCGNO76038 276 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 GJB5O95377 273 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 POU2F1P14859 743 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 MT3P25713 68 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 CD80P33681 288 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 KCNJ11Q14654 390 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 CFAP221Q4G0U5 840 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 PDZK1Q5T2W1 519 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 FAM199XQ6PEV8 388 aaPredicted RBP5.74□□□□□ -1.49
NUP54-215ENST00000514313 C9orf40Q8IXQ3 194 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 FGFRL1Q8N441 504 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 VN1R17PQ8TDU5 208 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 RANBP9Q96S59 729 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 GFRA4Q9GZZ7 299 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 PPDPFQ9H3Y8 114 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 METTL7AQ9H8H3 244 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 FANCFQ9NPI8 374 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 PAK1IP1Q9NWT1 392 aaPredicted RBP5.74□□□□□ -1.49
NUP54-215ENST00000514313 SENP1Q9P0U3 644 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 ADAM28Q9UKQ2 775 aa5.74□□□□□ -1.49
NUP54-215ENST00000514313 AK6Q9Y3D8 172 aaKnown RBP5.74□□□□□ -1.49
NUP54-215ENST00000514313 ARHGEF35A5YM69 484 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 PP2D1A8MPX8 630 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 ZNF264O43296 627 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 FCMRO60667 390 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 RHBDL1O75783 438 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 NOL4O94818 638 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 CAPN2P17655 700 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 BCL3P20749 454 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 SERPINA2P20848 420 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 GDI1P31150 447 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 IL2RGP31785 369 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 MAGEA8P43361 318 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 ACTR3P61158 418 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 SLC22A6Q4U2R8 563 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 TPGS2Q68CL5 300 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 OR4F3Q6IEY1 312 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 ZNF600Q6ZNG1 722 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 SLC22A9Q8IVM8 553 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 NAXDQ8IW45 347 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 KIR3DL3Q8N743 410 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 Q8N9G6 341 aaPredicted RBP5.73□□□□□ -1.49
NUP54-215ENST00000514313 OR56B2PQ8NGI1 322 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 RASL10AQ92737 203 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 CELF6Q96J87 481 aaKnown RBP5.73□□□□□ -1.49
NUP54-215ENST00000514313 RPRD1AQ96P16 312 aaPredicted RBP5.73□□□□□ -1.49
NUP54-215ENST00000514313 CITED1Q99966 193 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 TUBGCP2Q9BSJ2 902 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 TM9SF3Q9HD45 589 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 ONECUT1Q9UBC0 465 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 SAMD4AQ9UPU9 718 aaKnown RBP5.73□□□□□ -1.49
NUP54-215ENST00000514313 PIGLQ9Y2B2 252 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 PCNX3Q9H6A9 2034 aa5.73□□□□□ -1.49
NUP54-215ENST00000514313 IGHV2-70DA0A0C4DH43 119 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 HELTA6NFD8 242 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 FAM220BPB1ANY3 271 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 E9PLD3 99 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 NBR2O15453 112 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 LATO43561 262 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 SCRG1O75711 98 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 CYP2B6P20813 491 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 IGHV1-2P23083 117 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 NF2P35240 595 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 EFNB2P52799 333 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 HSPA2P54652 639 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 SEC61GP60059 68 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 ZFP36L1Q07352 338 aaKnown RBP5.72□□□□□ -1.49
NUP54-215ENST00000514313 RUNX3Q13761 415 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 SFT2D3Q587I9 215 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 TAS2R42Q7RTR8 314 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 TPRA1Q86W33 373 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 NBPF5PQ86XG9 351 aaPredicted RBP5.72□□□□□ -1.49
NUP54-215ENST00000514313 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 MFSD9Q8NBP5 474 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 OR4D9Q8NGE8 314 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 AKR7LQ8NHP1 331 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 TFB1MQ8WVM0 346 aaKnown RBP5.72□□□□□ -1.49
NUP54-215ENST00000514313 TOMM40LQ969M1 308 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 PSMG2Q969U7 264 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 SPATA16Q9BXB7 569 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 GLT8D2Q9H1C3 349 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 RHBGQ9H310 441 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 SGK2Q9HBY8 427 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 CLEC5AQ9NY25 188 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 PRSS21Q9Y6M0 314 aa5.72□□□□□ -1.49
NUP54-215ENST00000514313 IGKV3D-15A0A087WSY6 115 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 FRG2CA6NGY1 282 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 SNTNA6NMZ2 147 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 A8MX80 341 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 SRRM5B3KS81 715 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 H0Y8G0 127 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 FOXE1O00358 373 aaPredicted RBP5.71□□□□□ -1.5
NUP54-215ENST00000514313 RS1O15537 224 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 ECI2O75521 394 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 FOLR2P14207 255 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 NCF2P19878 526 aaPredicted RBP5.71□□□□□ -1.5
NUP54-215ENST00000514313 IMPDH1P20839 514 aa5.71□□□□□ -1.5
NUP54-215ENST00000514313 RPL23AP62750 156 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms