RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CHRNEQ04844 493 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 FOXF2Q12947 444 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 FGFBP1Q14512 234 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TOMM34Q15785 309 aaPredicted RBP8.74□□□□□ -1.01
RNF4-221ENST00000513643 PDZK1Q5T2W1 519 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 RAET1LQ5VY80 246 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TNFAIP8L2Q6P589 184 aaPredicted RBP8.74□□□□□ -1.01
RNF4-221ENST00000513643 LRRC74BQ6ZQY2 392 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 ZNF621Q6ZSS3 439 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 ANKFN1Q8N957 763 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 GATSQ8NAP1 163 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 OR5M1Q8NGP8 315 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 OR10Q1Q8NGQ4 319 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 OR5W2Q8NH69 310 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 C14orf79Q96F83 325 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 ITCHQ96J02 903 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TRIB1Q96RU8 372 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 SIKE1Q9BRV8 207 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 RNF122Q9H9V4 155 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TPT1P8Q9HAU6 139 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 SLC25A37Q9NYZ2 338 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 PRDM4Q9UKN5 801 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 MKLN1Q9UL63 735 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 CARD8Q9Y2G2 431 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 L3MBTL1Q9Y468 752 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 ZNF175Q9Y473 711 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 PCDHB14Q9Y5E9 798 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 HEATR5AQ86XA9 2040 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 A0A096LPI6 279 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 FAM221AA4D161 298 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 H0Y3Z8 333 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 H3BNH8 94 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ZNF264O43296 627 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ATP8B1O43520 1251 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ADAM11O75078 769 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 H6PDO95479 791 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 KRT75O95678 551 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 CGAP01215 116 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 HPGDP15428 266 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 POU3F2P20265 443 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 CAPN3P20807 821 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ELK4P28324 431 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 OPRM1P35372 400 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 CHI3L1P36222 383 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 KIR2DL2P43627 348 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 EEFSECP57772 596 aaKnown RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 EEF1A1P68104 462 aaKnown RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 SRYQ05066 204 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 GPR68Q15743 365 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 SYPL1Q16563 259 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 NDUFAF6Q330K2 333 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 GTDC1Q4AE62 458 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 TIGD2Q4W5G0 525 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 PAGE3Q5JUK9 113 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ATAD3BQ5T9A4 648 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 EEF1A1P5Q5VTE0 462 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 METTL21CQ5VZV1 264 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 CGB2Q6NT52 195 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 SLC2A7Q6PXP3 512 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 PLXDC2Q6UX71 529 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 DLEU7Q6UYE1 221 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 RFWD2Q8NHY2 731 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 PHOSPHO1Q8TCT1 267 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 TSPEARQ8WU66 669 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 DYDC1Q8WWB3 177 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 FIG4Q92562 907 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 CHMP6Q96FZ7 201 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 SH3YL1Q96HL8 342 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 MRGPRX4Q96LA9 322 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 SFXN3Q9BWM7 321 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 RSPO3Q9BXY4 272 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 RMND5AQ9H871 391 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 EXOSC3Q9NQT5 275 aaKnown RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 SLAMF8Q9P0V8 285 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 VDAC3Q9Y277 283 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 WDR45Q9Y484 360 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 CHST2Q9Y4C5 530 aa8.73□□□□□ -1.01
RNF4-221ENST00000513643 GPC6Q9Y625 555 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 HRNRQ86YZ3 2850 aaPredicted RBP8.73□□□□□ -1.01
RNF4-221ENST00000513643 A0A0J9YW62 118 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 A0A1W2PNV4 684 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 A0A1W2PP18 115 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 FAM90A27PA6NNH2 459 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 FAAHO00519 579 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 DVL2O14641 736 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 TMIGD3P0DMS9 266 aaPredicted RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 UBL4AP11441 157 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 COX6B1P14854 86 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 TCEA1P23193 301 aaKnown RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 SHC1P29353 583 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 KCNJ10P78508 379 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 SQLEQ14534 574 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 RGNQ15493 299 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 ESPNLQ6ZVH7 1005 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 EIF3MQ7L2H7 374 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms