RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FBN3Q75N90 2809 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 A0A1W2PPR1 153 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 DEFB108AA8MXU0 73 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 H0YC42 278 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 SLC28A1O00337 649 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 TMCC2O75069 709 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 SYNGR4O95473 234 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 HSPA4LO95757 839 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 CHEK2O96017 543 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 CGAP01215 116 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 NGFRP08138 427 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 PABPC4LP0CB38 370 aaKnown RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 UROSP10746 265 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 NEFHP12036 1026 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 HPGDP15428 266 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 ME2P23368 584 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 GCAP28676 217 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 SUCLG1P53597 346 aaKnown RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 TPD52P55327 224 aaPredicted RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 CLDN20P56880 219 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 DNAJB13P59910 316 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 SLC29A2Q14542 456 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 EXOC3L2Q2M3D2 409 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 BEX5Q5H9J7 111 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 GTF2IRD2BQ6EKJ0 949 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 PPP4R4Q6NUP7 873 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 PLEKHM3Q6ZWE6 761 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 GTF2IRD2Q86UP8 949 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 MISPQ8IVT2 679 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 CEP112Q8N8E3 955 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 CDRT4Q8N9R6 151 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 ZNF610Q8N9Z0 462 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 CCDC63Q8NA47 563 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 OR5M1Q8NGP8 315 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 OR6K3Q8NGY3 331 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 ZBTB8AQ96BR9 441 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 ZBED6CLQ96FA7 236 aaPredicted RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 ZC3HAV1LQ96H79 300 aaKnown RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 GMPPAQ96IJ6 420 aaPredicted RBP6.44□□□□□ -1.38
USP46-208ENST00000512656 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 PPCSQ9HAB8 311 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 LRTM1Q9HBL6 345 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 EQTNQ9NQ60 294 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 TIGARQ9NQ88 270 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 C1orf109Q9NX04 203 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 TBK1Q9UHD2 729 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 MID2Q9UJV3 735 aa6.44□□□□□ -1.38
USP46-208ENST00000512656 GXYLT2A0PJZ3 443 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 C7orf72A4D263 438 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 C17orf51A8MQB3 221 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 B4DXG7 233 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ALG1L2C9J202 215 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 NPIPB8E9PQR5 432 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 G3V2L1 256 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 H7C1Q1 480 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 UBFD1O14562 309 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 TBX19O60806 448 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SS18L1O75177 396 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 SOX30O94993 753 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 NKX2-2O95096 273 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CPA3P15088 417 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 IL11P20809 199 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 PRPH2P23942 346 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CRHR1P34998 444 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 EIF1P41567 113 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 ASMTP46597 345 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ZNF41P51814 821 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 PRKAG1P54619 331 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 NR1H2P55055 460 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 MANFP55145 182 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 FOXA1P55317 472 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ERVFRD-1P60508 538 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 HSPB3Q12988 150 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 GUSBP1Q15486 140 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP46-208ENST00000512656 TMEM44Q2T9K0 475 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 GRAMD1BQ3KR37 738 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CPTPQ5TA50 214 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 FAM219BQ5XKK7 198 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ZCCHC12Q6PEW1 402 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ESPNLQ6ZVH7 1005 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 Q71RC1 249 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 ZNF551Q7Z340 670 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 ZNF550Q7Z398 422 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SZRD1Q7Z422 152 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 R3HCC1LQ7Z5L2 792 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 YTHDF3Q7Z739 585 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 EXOC3L1Q86VI1 746 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 GTPBP8Q8N3Z3 284 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 COX18Q8N8Q8 333 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 NUP43Q8NFH3 380 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 OR10D3Q8NH80 312 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ACTRT2Q8TDY3 377 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 TMEM171Q8WVE6 324 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SLC9A6Q92581 669 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 PPCDCQ96CD2 204 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 REXO5Q96IC2 774 aaKnown RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 Q96MF0 132 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CCT7Q99832 543 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SMR3AQ99954 134 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms