RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	PIGV	Q9NUD9	493 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	IMPAD1	Q9NX62	359 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	CELA1	Q9UNI1	258 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	ENTPD4	Q9Y227	616 aa		4.15	□□□□□ -1.75
LINC01088-208	ENST00000511895	EI24	O14681	340 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	GOSR1	O95249	250 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	FCAR	P24071	287 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	HOXA6	P31267	233 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	PI4KA	P42356	2102 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	BTD	P43251	543 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	PITPNB	P48739	271 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	SLC25A1	P53007	311 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	NDP	Q00604	133 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	PAX2	Q02962	417 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	SEL1L2	Q5TEA6	688 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	CGB2	Q6NT52	195 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF410	Q86VK4	478 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	PYROXD2	Q8N2H3	581 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	HIST1H2AC	Q93077	130 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	PIWIL1	Q96J94	861 aa	Known RBP	4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	FAM173A	Q9BQD7	235 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	DEFB126	Q9BYW3	111 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	ESM1	Q9NQ30	184 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	COPS7A	Q9UBW8	275 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895		Q9UF83	564 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	ACAN	P16112	2415 aa		4.14	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCDC69	A6NI79	296 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	GPAA1	O43292	621 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	HSF2BP	O75031	334 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	PDE5A	O76074	875 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	GSTA1	P08263	222 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	DUX4L4	P0CJ87	422 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	FAS	P25445	335 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	MARCKS	P29966	332 aa	Predicted RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	SAA4	P35542	130 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	MDH2	P40926	338 aa	Known RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	LYZ	P61626	148 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCZ1B	P86790	482 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCZ1	P86791	482 aa	Predicted RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	PPP1R8	Q12972	351 aa	Known RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	TTC31	Q49AM3	519 aa	Predicted RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	CMPK2	Q5EBM0	449 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	CWC27	Q6UX04	472 aa	Known RBP	4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	ADAMTSL5	Q6ZMM2	481 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	STOX1	Q6ZVD7	989 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	PRSS48	Q7RTY5	328 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	SNX21	Q969T3	373 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	TRIM9	Q9C026	710 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	TMEM245	Q9H330	911 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	COMMD8	Q9NX08	183 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	NDUFA13	Q9P0J0	144 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	KIF25-AS1	Q9Y6Z4	181 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	PHLPP2	Q6ZVD8	1323 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	RAD50	Q92878	1312 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	EML5	Q05BV3	1969 aa		4.13	□□□□□ -1.75
LINC01088-208	ENST00000511895	LAMA4	Q16363	1823 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	RANBP6	O60518	1105 aa	Known RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	TSC22D2	O75157	780 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	IGKV5-2	P06315	115 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	APRT	P07741	180 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	GIG44	P09565	113 aa	Predicted RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	SLC35E2	P0CK97	266 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCDC192	P0DO97	292 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	PVR	P15151	417 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	TNFRSF4	P43489	277 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CXCL6	P80162	114 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	GFPT1	Q06210	699 aa	Predicted RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CLPP	Q16740	277 aa	Predicted RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	MS4A13	Q5J8X5	152 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	C1QTNF12	Q5T7M4	302 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	PRAMEF7	Q5VXH5	474 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	TATDN1	Q6P1N9	297 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	GCNT7	Q6ZNI0	430 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	BNIPL	Q7Z465	357 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	FBXO16	Q8IX29	292 aa	Predicted RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF525	Q8N782	197 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	OR52J3	Q8NH60	311 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	KRT35	Q92764	455 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCDC43	Q96MW1	224 aa	Known RBP	4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZIM3	Q96PE6	472 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	ACCS	Q96QU6	501 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	OR5M11	Q96RB7	305 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCT8L2	Q96SF2	557 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CPXM1	Q96SM3	734 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	TEX13B	Q9BXU2	312 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	CLEC4E	Q9ULY5	219 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZMYM6	O95789	1325 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	TG	P01266	2768 aa		4.12	□□□□□ -1.75
LINC01088-208	ENST00000511895	NPIPA5	A0A0B4J1W7	369 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895		A0A0J9YVX5	310 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	KLF18	A0A0U1RQI7	1052 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	NPIPA5	E9PKD4	350 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	TLR4	O00206	839 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	TNFSF11	O14788	317 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	SYNGR4	O95473	234 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	IGHV3-9	P01782	118 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	HLA-E	P13747	358 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms