RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TTC36A6NLP5 189 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 COX5AP20674 150 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 IGHV1-2P23083 117 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 RFX3P48380 749 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 DEFA6Q01524 100 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 IFFO1Q0D2I5 559 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 NAB1Q13506 487 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 HEPACAMQ14CZ8 416 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 PDCD2Q16342 344 aaPredicted RBP10.17□□□□□ -0.78
RNF4-216ENST00000511859 SWI5Q1ZZU3 235 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 GGTA1PQ4G0N0 100 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 SGO1Q5FBB7 561 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 B3GLCTQ6Y288 498 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 CMC1Q7Z7K0 106 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 ZNF433Q8N7K0 673 aaPredicted RBP10.17□□□□□ -0.78
RNF4-216ENST00000511859 LINC01356Q8N9X3 169 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 POC1BQ8TC44 478 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 EXOSC8Q96B26 276 aaKnown RBP10.17□□□□□ -0.78
RNF4-216ENST00000511859 SOX7Q9BT81 388 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 SRXN1Q9BYN0 137 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 FKRPQ9H9S5 495 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 PRSS50Q9UI38 385 aa10.17□□□□□ -0.78
RNF4-216ENST00000511859 C19orf53Q9UNZ5 99 aaPredicted RBP10.17□□□□□ -0.78
RNF4-216ENST00000511859 RGS14O43566 566 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 KCNH1O95259 989 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 PDYNP01213 254 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 NGFRP08138 427 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 ELK4P28324 431 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 SFTPDP35247 375 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 ZNF83P51522 516 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 SLC18A2Q05940 514 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 GRAMD1BQ3KR37 738 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 BEND6Q5SZJ8 279 aaPredicted RBP10.16□□□□□ -0.78
RNF4-216ENST00000511859 MISPQ8IVT2 679 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 MREGQ8N565 214 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 C1orf52Q8N6N3 182 aaKnown RBP10.16□□□□□ -0.78
RNF4-216ENST00000511859 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
RNF4-216ENST00000511859 SELENOMQ8WWX9 145 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 BBS4Q96RK4 519 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 PSD2Q9BQI7 771 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 LMF2Q9BU23 707 aaKnown RBP10.16□□□□□ -0.78
RNF4-216ENST00000511859 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 VPS29Q9UBQ0 182 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 MCM8Q9UJA3 840 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 SNX6Q9UNH7 406 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 ATP23Q9Y6H3 246 aa10.16□□□□□ -0.78
RNF4-216ENST00000511859 CIB4A0PJX0 185 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 HMX2A2RU54 273 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 TRIM49D1C9J1S8 452 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 TRIM77I1YAP6 450 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 IL3P08700 152 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 LINGO3P0C6S8 592 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 CHN2P52757 468 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 RAC3P60763 192 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 PHC1P78364 1004 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 CHRNEQ04844 493 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 RASGEF1BQ0VAM2 473 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 TRAF3Q13114 568 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 CARTPTQ16568 116 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 MST1LQ2TV78 715 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 TMEM176BQ3YBM2 270 aaPredicted RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 OR7E24Q6IFN5 339 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 KLC3Q6P597 504 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 CENPLQ8N0S6 344 aaPredicted RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 OR52N5Q8NH56 324 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.15□□□□□ -0.78
RNF4-216ENST00000511859 ZIM3Q96PE6 472 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 SORCS2Q96PQ0 1159 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 FARSBQ9NSD9 589 aaKnown RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 NTMQ9P121 344 aa10.15□□□□□ -0.78
RNF4-216ENST00000511859 PSMC3IPQ9P2W1 217 aaPredicted RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 ING1Q9UK53 422 aaPredicted RBP10.15□□□□□ -0.78
RNF4-216ENST00000511859 LRP5LA4QPB2 252 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 MYO1GB0I1T2 1018 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 M0R1B8 84 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 UPK1AO00322 258 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZNF195O14628 629 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 EFNA2O43921 213 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 RAD51DO75771 328 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 PSMG1O95456 288 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 TACSTD2P09758 323 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 HSD3B1P14060 373 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 ENPP1P22413 925 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 HSD3B2P26439 372 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GIFP27352 417 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SHC1P29353 583 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GABRA3P34903 492 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SERPINB9P50453 376 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 LGALS3BPQ08380 585 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZSWIM7Q19AV6 140 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 C1QTNF12Q5T7M4 302 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 USP43Q70EL4 1123 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GALNT5Q7Z7M9 940 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZNF100Q8IYN0 542 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms